ID A0A085N3X9_9BILA Unreviewed; 593 AA.
AC A0A085N3X9;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 22-FEB-2023, entry version 25.
DE RecName: Full=HTH CENPB-type domain-containing protein {ECO:0000259|PROSITE:PS51253};
DE Flags: Fragment;
GN ORFNames=M514_16004 {ECO:0000313|EMBL:KFD71894.1}, M514_23664
GN {ECO:0000313|EMBL:KFD64175.1};
OS Trichuris suis (pig whipworm).
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia;
OC Trichinellida; Trichuridae; Trichuris.
OX NCBI_TaxID=68888 {ECO:0000313|EMBL:KFD64175.1};
RN [1] {ECO:0000313|EMBL:KFD64175.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DCEP-RM93F {ECO:0000313|EMBL:KFD64175.1};
RX PubMed=24929829; DOI=10.1038/ng.3012;
RA Jex A.R., Nejsum P., Schwarz E.M., Hu L., Young N.D., Hall R.S.,
RA Korhonen P.K., Liao S., Thamsborg S., Xia J., Xu P., Wang S.,
RA Scheerlinck J.P., Hofmann A., Sternberg P.W., Wang J., Gasser R.B.;
RT "Genome and transcriptome of the porcine whipworm Trichuris suis.";
RL Nat. Genet. 46:701-706(2014).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; KL367560; KFD64175.1; -; Genomic_DNA.
DR EMBL; KL367480; KFD71894.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A085N3X9; -.
DR Proteomes; UP000030758; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR Gene3D; 1.10.10.60; Homeodomain-like; 2.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR004875; DDE_SF_endonuclease_dom.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR006600; HTH_CenpB_DNA-bd_dom.
DR InterPro; IPR007889; HTH_Psq.
DR InterPro; IPR036397; RNaseH_sf.
DR PANTHER; PTHR19303:SF26; TIGGER TRANSPOSABLE ELEMENT-DERIVED PROTEIN 1; 1.
DR PANTHER; PTHR19303; TRANSPOSON; 1.
DR Pfam; PF04218; CENP-B_N; 1.
DR Pfam; PF03184; DDE_1; 1.
DR Pfam; PF03221; HTH_Tnp_Tc5; 1.
DR SMART; SM00674; CENPB; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 2.
DR PROSITE; PS51253; HTH_CENPB; 1.
PE 4: Predicted;
FT DOMAIN 70..149
FT /note="HTH CENPB-type"
FT /evidence="ECO:0000259|PROSITE:PS51253"
FT REGION 562..593
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 562..577
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 593
FT /evidence="ECO:0000313|EMBL:KFD64175.1"
SQ SEQUENCE 593 AA; 67882 MW; 757672A3C6DE8112 CRC64;
MASSRPNEKK SRTSLSLEEK LHMIRLSESG MSNTEIGRRL GIVRQTVSQV IMSKEKFLKE
VRNATPTNTK RIRQRCSLIA DMEKILTVWI EDQTSRNIPL SQDIIQFKAL ALFNTMKAKR
GQEASEEKFE ASRGWFMRFK ERSQLRNVRV KGEAASADAG AAAAYPSELG DIIDEGGYTS
QQIFNIDETG LYWKKMPSRS FIAKEERSMP GFKVSKERLT LLLGANAAGD FKLKPMLIYR
SENPRALKNY TKSTLPVLYR WNQAAWMTAH LFTSWFTDYF KPTVEAYCAE NKIPFKILLT
MDNAPCHPRA VAGMYKEINV VFLPANTSCL LQPMDQGVIS TFKSYYLRNT LRMAITAIDK
DTSERDGKNK LKDFWKGYSI LDAIKNNCDS WEEISRGTLT GAWNALTPSL PHNWEGTEAS
LKEVTEDVIS MARELELEVE QEDVTEMLQS HDKPLTDEEL FLIDEQRRSF REVEHIRHTV
DAHQAEMTTK DLQRYIELVD EAAAGFERID PNFERSSTVS KMLSSSISCY KEIHRERKRR
SLQQVSLLRY LSNLPQLSQS SSIRADDIEQ PSTSKQGPVL RKLPRLLDSS DSE
//
