ID A0A087G019_ARAAL Unreviewed; 769 AA.
AC A0A087G019;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 32.
DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KFK23221.1};
DE Flags: Fragment;
GN ORFNames=AALP_AAs47412U000100 {ECO:0000313|EMBL:KFK23221.1};
OS Arabis alpina (Alpine rock-cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis.
OX NCBI_TaxID=50452 {ECO:0000313|EMBL:KFK23221.1, ECO:0000313|Proteomes:UP000029120};
RN [1] {ECO:0000313|Proteomes:UP000029120}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Pajares {ECO:0000313|Proteomes:UP000029120};
RX PubMed=27246759; DOI=10.1038/nplants.2014.23;
RA Willing E.M., Rawat V., Mandakova T., Maumus F., James G.V.,
RA Nordstroem K.J., Becker C., Warthmann N., Chica C., Szarzynska B.,
RA Zytnicki M., Albani M.C., Kiefer C., Bergonzi S., Castaings L.,
RA Mateos J.L., Berns M.C., Bujdoso N., Piofczyk T., de Lorenzo L.,
RA Barrero-Sicilia C., Mateos I., Piednoel M., Hagmann J., Chen-Min-Tao R.,
RA Iglesias-Fernandez R., Schuster S.C., Alonso-Blanco C., Roudier F.,
RA Carbonero P., Paz-Ares J., Davis S.J., Pecinka A., Quesneville H.,
RA Colot V., Lysak M.A., Weigel D., Coupland G., Schneeberger K.;
RT "Genome expansion of Arabis alpina linked with retrotransposition and
RT reduced symmetric DNA methylation.";
RL Nat. Plants 1:14023-14023(2015).
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DR EMBL; KL981272; KFK23221.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A087G019; -.
DR EnsemblPlants; KFK23221; KFK23221; AALP_AAs47412U000100.
DR Gramene; KFK23221; KFK23221; AALP_AAs47412U000100.
DR eggNOG; KOG0017; Eukaryota.
DR OMA; CENGDIM; -.
DR OrthoDB; 692149at2759; -.
DR Proteomes; UP000029120; Unassembled WGS sequence.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0004523; F:RNA-DNA hybrid ribonuclease activity; IEA:InterPro.
DR GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR CDD; cd09279; RNase_HI_like; 1.
DR Gene3D; 1.10.340.70; -; 1.
DR Gene3D; 3.10.20.370; -; 1.
DR Gene3D; 3.30.70.270; -; 2.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 2.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR001584; Integrase_cat-core.
DR InterPro; IPR041588; Integrase_H2C2.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR002156; RNaseH_domain.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR000477; RT_dom.
DR InterPro; IPR041577; RT_RNaseH_2.
DR PANTHER; PTHR37984:SF7; INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR37984; PROTEIN CBG26694; 1.
DR Pfam; PF17921; Integrase_H2C2; 1.
DR Pfam; PF17919; RT_RNaseH_2; 1.
DR Pfam; PF00665; rve; 1.
DR Pfam; PF00078; RVT_1; 1.
DR Pfam; PF13456; RVT_3; 1.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 2.
DR PROSITE; PS50994; INTEGRASE; 1.
DR PROSITE; PS50879; RNASE_H_1; 1.
DR PROSITE; PS50878; RT_POL; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000029120}.
FT DOMAIN 1..55
FT /note="Reverse transcriptase"
FT /evidence="ECO:0000259|PROSITE:PS50878"
FT DOMAIN 277..407
FT /note="RNase H type-1"
FT /evidence="ECO:0000259|PROSITE:PS50879"
FT DOMAIN 599..757
FT /note="Integrase catalytic"
FT /evidence="ECO:0000259|PROSITE:PS50994"
FT NON_TER 769
FT /evidence="ECO:0000313|EMBL:KFK23221.1"
SQ SEQUENCE 769 AA; 86331 MW; B0CBB2303971502D CRC64;
MEVYIDDMLV KSQNTTDHVG HLRDCFRILN EYGMKLNPTK CTFGVTSGEF LGYIVTQRGI
EANPKQITAI VDLPSPKNKR EVQRLTVRIA ALNRFISRST DRSLPFYQLL RGNKAFVWDD
KCEAASNELK AYLTTPPVLS KPEHGETLYL YVSVTNTAVS GVLVREDRGD QKPIFYVSKS
LDGAESRYPT LEKLALAIVV AARKLRPYFQ SHTIAVMSAQ PLRTILHSPS QSGRMAKWAV
ELSEYDIEYR NRTSTKSQAL ADFLMELPPE AIPITPTSQD WSLYIDGSAS QHGCGAGIRL
ISPTNEILEQ CFRLEFKATN NEAEWEALIA GLRLAKGVGV KRVHAYSDSQ LVTNHMNHDY
DARDERMNAY LKLTEALILS NFDGFVITNI PRSENFAADA LASLATSSDS DLKRIIPVET
IPDPSIDLPC GTSRMSVIMN NSEVDGIEDD PDRIDPVDQA VHTDSTDHLD HADQIDWRDE
ISNYIKDGEV PEDKWAARRL KSKSAHYVAM GGKLYKWSAA GVLLLCVNDD TISAIMTETH
EGEGGNHSGG RTLAMKIKKL GFYWPTMLTD CADYARRCEK CQRHGPMINS PTEPLTTATS
AYPFMRWAMD IFGPLPRSKQ KRFVIVVTDY FTKWVEAESF AKIKADDVQD FVWKFVICRH
GLPYEIIADN GSQFISKTFE DFCAKWKIRL NKSTPRFPQG NGQAEATNKA IISELKKRLD
EKKGTWADEL DGVLWSLRTT PRQSTNRTPF SLAYGIEAMA PAEVSVNSL
//
