ID A0A087G1D0_ARAAL Unreviewed; 653 AA.
AC A0A087G1D0;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 33.
DE RecName: Full=Zinc finger PHD-type domain-containing protein {ECO:0000259|SMART:SM00249};
GN ORFNames=AALP_AAs63807U000300 {ECO:0000313|EMBL:KFK23682.1};
OS Arabis alpina (Alpine rock-cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis.
OX NCBI_TaxID=50452 {ECO:0000313|EMBL:KFK23682.1, ECO:0000313|Proteomes:UP000029120};
RN [1] {ECO:0000313|Proteomes:UP000029120}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Pajares {ECO:0000313|Proteomes:UP000029120};
RX PubMed=27246759; DOI=10.1038/nplants.2014.23;
RA Willing E.M., Rawat V., Mandakova T., Maumus F., James G.V.,
RA Nordstroem K.J., Becker C., Warthmann N., Chica C., Szarzynska B.,
RA Zytnicki M., Albani M.C., Kiefer C., Bergonzi S., Castaings L.,
RA Mateos J.L., Berns M.C., Bujdoso N., Piofczyk T., de Lorenzo L.,
RA Barrero-Sicilia C., Mateos I., Piednoel M., Hagmann J., Chen-Min-Tao R.,
RA Iglesias-Fernandez R., Schuster S.C., Alonso-Blanco C., Roudier F.,
RA Carbonero P., Paz-Ares J., Davis S.J., Pecinka A., Quesneville H.,
RA Colot V., Lysak M.A., Weigel D., Coupland G., Schneeberger K.;
RT "Genome expansion of Arabis alpina linked with retrotransposition and
RT reduced symmetric DNA methylation.";
RL Nat. Plants 1:14023-14023(2015).
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DR EMBL; KL976582; KFK23682.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A087G1D0; -.
DR EnsemblPlants; KFK23682; KFK23682; AALP_AAs63807U000300.
DR Gramene; KFK23682; KFK23682; AALP_AAs63807U000300.
DR eggNOG; ENOG502RANS; Eukaryota.
DR OMA; HKINDYE; -.
DR OrthoDB; 1110255at2759; -.
DR Proteomes; UP000029120; Unassembled WGS sequence.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR Gene3D; 3.30.60.20; -; 1.
DR InterPro; IPR046349; C1-like_sf.
DR InterPro; IPR004146; DC1.
DR InterPro; IPR001965; Znf_PHD.
DR PANTHER; PTHR32410; CYSTEINE/HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN; 1.
DR PANTHER; PTHR32410:SF154; CYSTEINE_HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN-RELATED; 1.
DR Pfam; PF03107; C1_2; 5.
DR SMART; SM00249; PHD; 4.
DR SUPFAM; SSF57889; Cysteine-rich domain; 7.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000029120};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771}.
FT DOMAIN 134..217
FT /note="Zinc finger PHD-type"
FT /evidence="ECO:0000259|SMART:SM00249"
FT DOMAIN 253..312
FT /note="Zinc finger PHD-type"
FT /evidence="ECO:0000259|SMART:SM00249"
FT DOMAIN 393..453
FT /note="Zinc finger PHD-type"
FT /evidence="ECO:0000259|SMART:SM00249"
FT DOMAIN 499..559
FT /note="Zinc finger PHD-type"
FT /evidence="ECO:0000259|SMART:SM00249"
SQ SEQUENCE 653 AA; 75317 MW; DCF8EBA8EB5EBE58 CRC64;
MESERVSLPL IHEHLMMPWN DFRKGDCCGR FESISDGYYC ESCDFFVHKK CSDEITESIQ
HPSHSLHPLC LRSDPHHNCN LCGRRIVNLY YRCQICDFDV DLHCVKYPPP EVTDVSDTHH
HKLTLLKELT DFDCCAKCGE TGDNEFAYEC HVCELTFHVD CVWNQPEVEH PLEVNHSYHS
LHPLKLLTGQ PPEYSDGKCR LCGRNVGKLF YHCSSCNFTL DMHCTLDPPP QSLMDLKAHD
HQLILRPRLD SFTCNACGLK GDRSPYACFQ CGFMIHQDCF GLPRVININR HDHRVYRTSV
LGVLNSVCGV CRKKVDWTCG GYTCQRCPGY VVHSKCATRE DVWNGKELEG VPEEIQDNEP
YVAIDENTIQ HFSHKEHYLR LHVHRLLWEE NKHCNACSYP ICLQSFYACI DCDFVLHQNC
AELPKRKWHL LYGEQLTLVT TSKAGYFDCD ACGKTCNGFA YQHGATKIDF ICASISEPFI
HPSHPYHPLY YIPQDKEEIC NGCNMKESHV LRCTEDGCEF VLGFRCATLP QVVKLDNDLL
SLWYGNEMTS GKYWCDICEK ELNPETWFYK DRLATAHIEC VVGDFLGLVP RSTILYRGKS
FEVVLNNNIC RPFCRWCKSR CIYPIILKLL RTSDTCFCSD KCICEDLSLK PED
//
