ID A0A087G3F0_ARAAL Unreviewed; 467 AA.
AC A0A087G3F0;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 24-JAN-2024, entry version 33.
DE RecName: Full=RNA-polymerase II-associated protein 3-like C-terminal domain-containing protein {ECO:0000259|Pfam:PF13877};
GN ORFNames=AALP_AAs74350U000300 {ECO:0000313|EMBL:KFK24402.1};
OS Arabis alpina (Alpine rock-cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis.
OX NCBI_TaxID=50452 {ECO:0000313|EMBL:KFK24402.1, ECO:0000313|Proteomes:UP000029120};
RN [1] {ECO:0000313|Proteomes:UP000029120}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Pajares {ECO:0000313|Proteomes:UP000029120};
RX PubMed=27246759; DOI=10.1038/nplants.2014.23;
RA Willing E.M., Rawat V., Mandakova T., Maumus F., James G.V.,
RA Nordstroem K.J., Becker C., Warthmann N., Chica C., Szarzynska B.,
RA Zytnicki M., Albani M.C., Kiefer C., Bergonzi S., Castaings L.,
RA Mateos J.L., Berns M.C., Bujdoso N., Piofczyk T., de Lorenzo L.,
RA Barrero-Sicilia C., Mateos I., Piednoel M., Hagmann J., Chen-Min-Tao R.,
RA Iglesias-Fernandez R., Schuster S.C., Alonso-Blanco C., Roudier F.,
RA Carbonero P., Paz-Ares J., Davis S.J., Pecinka A., Quesneville H.,
RA Colot V., Lysak M.A., Weigel D., Coupland G., Schneeberger K.;
RT "Genome expansion of Arabis alpina linked with retrotransposition and
RT reduced symmetric DNA methylation.";
RL Nat. Plants 1:14023-14023(2015).
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DR EMBL; KL969011; KFK24402.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A087G3F0; -.
DR EnsemblPlants; KFK24402; KFK24402; AALP_AAs74350U000300.
DR Gramene; KFK24402; KFK24402; AALP_AAs74350U000300.
DR eggNOG; KOG4648; Eukaryota.
DR OMA; THVLYAN; -.
DR OrthoDB; 2294768at2759; -.
DR Proteomes; UP000029120; Unassembled WGS sequence.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 1.
DR InterPro; IPR025986; RPAP3-like_C.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR001440; TPR_1.
DR InterPro; IPR019734; TPR_repeat.
DR PANTHER; PTHR47329; OS05G0129900 PROTEIN; 1.
DR PANTHER; PTHR47329:SF1; OS05G0129900 PROTEIN; 1.
DR Pfam; PF13877; RPAP3_C; 1.
DR Pfam; PF00515; TPR_1; 1.
DR Pfam; PF13181; TPR_8; 1.
DR SMART; SM00028; TPR; 3.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS50005; TPR; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000029120};
KW TPR repeat {ECO:0000256|ARBA:ARBA00022803, ECO:0000256|PROSITE-
KW ProRule:PRU00339}.
FT REPEAT 75..108
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT DOMAIN 343..432
FT /note="RNA-polymerase II-associated protein 3-like C-
FT terminal"
FT /evidence="ECO:0000259|Pfam:PF13877"
FT REGION 30..58
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 236..314
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 38..58
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 255..299
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 467 AA; 52960 MW; 227D798238CA9198 CRC64;
MSTTPSKHGR DLTQGFLNDL QDWELSFKDK DKKIKQQQPT HFSNLTSEKF RPSGSGQYDF
AKNYAQVNDE SQLDANSEKE QGNEFFKQKK FNEAIDCYSR SIALSPNAVA YANRAMAYLK
IKRYREAEVD CTEALNLDDR YIKAYSRRAT ARKELGMLKE AKEDAEFALR LEPQSQELKK
QYADIKSFLE KEIIQKATGA MQSTAQELLK TAGLKKKTKM PNTEMNLKPV TLEAKTNGDM
VRPVSGSKES SGKKLIENVQ PEEKNNEGSR KIPAITEHVD SKKVTPRSLA YETEARSSDR
NSTRPSGLGN QVSKKVELKP SVQELATHAA SLAVAEVSKN IKAPKSAYEF ENFWRSFLGD
RALQTQLLKV MNPSSLPQIF KNALTSPVLV DILKCVALFF AEDMDLAVKY IENLTKVPRF
NMIVMCLTST EKNELLMIWN DVFCNKATPV EHAEVLDKLR SRYYLKQ
//