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Database: UniProt
Entry: A0A087G3F0_ARAAL
LinkDB: A0A087G3F0_ARAAL
Original site: A0A087G3F0_ARAAL 
ID   A0A087G3F0_ARAAL        Unreviewed;       467 AA.
AC   A0A087G3F0;
DT   29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT   29-OCT-2014, sequence version 1.
DT   24-JAN-2024, entry version 33.
DE   RecName: Full=RNA-polymerase II-associated protein 3-like C-terminal domain-containing protein {ECO:0000259|Pfam:PF13877};
GN   ORFNames=AALP_AAs74350U000300 {ECO:0000313|EMBL:KFK24402.1};
OS   Arabis alpina (Alpine rock-cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis.
OX   NCBI_TaxID=50452 {ECO:0000313|EMBL:KFK24402.1, ECO:0000313|Proteomes:UP000029120};
RN   [1] {ECO:0000313|Proteomes:UP000029120}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Pajares {ECO:0000313|Proteomes:UP000029120};
RX   PubMed=27246759; DOI=10.1038/nplants.2014.23;
RA   Willing E.M., Rawat V., Mandakova T., Maumus F., James G.V.,
RA   Nordstroem K.J., Becker C., Warthmann N., Chica C., Szarzynska B.,
RA   Zytnicki M., Albani M.C., Kiefer C., Bergonzi S., Castaings L.,
RA   Mateos J.L., Berns M.C., Bujdoso N., Piofczyk T., de Lorenzo L.,
RA   Barrero-Sicilia C., Mateos I., Piednoel M., Hagmann J., Chen-Min-Tao R.,
RA   Iglesias-Fernandez R., Schuster S.C., Alonso-Blanco C., Roudier F.,
RA   Carbonero P., Paz-Ares J., Davis S.J., Pecinka A., Quesneville H.,
RA   Colot V., Lysak M.A., Weigel D., Coupland G., Schneeberger K.;
RT   "Genome expansion of Arabis alpina linked with retrotransposition and
RT   reduced symmetric DNA methylation.";
RL   Nat. Plants 1:14023-14023(2015).
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DR   EMBL; KL969011; KFK24402.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A087G3F0; -.
DR   EnsemblPlants; KFK24402; KFK24402; AALP_AAs74350U000300.
DR   Gramene; KFK24402; KFK24402; AALP_AAs74350U000300.
DR   eggNOG; KOG4648; Eukaryota.
DR   OMA; THVLYAN; -.
DR   OrthoDB; 2294768at2759; -.
DR   Proteomes; UP000029120; Unassembled WGS sequence.
DR   Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 1.
DR   InterPro; IPR025986; RPAP3-like_C.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   InterPro; IPR001440; TPR_1.
DR   InterPro; IPR019734; TPR_repeat.
DR   PANTHER; PTHR47329; OS05G0129900 PROTEIN; 1.
DR   PANTHER; PTHR47329:SF1; OS05G0129900 PROTEIN; 1.
DR   Pfam; PF13877; RPAP3_C; 1.
DR   Pfam; PF00515; TPR_1; 1.
DR   Pfam; PF13181; TPR_8; 1.
DR   SMART; SM00028; TPR; 3.
DR   SUPFAM; SSF48452; TPR-like; 1.
DR   PROSITE; PS50005; TPR; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000029120};
KW   TPR repeat {ECO:0000256|ARBA:ARBA00022803, ECO:0000256|PROSITE-
KW   ProRule:PRU00339}.
FT   REPEAT          75..108
FT                   /note="TPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT   DOMAIN          343..432
FT                   /note="RNA-polymerase II-associated protein 3-like C-
FT                   terminal"
FT                   /evidence="ECO:0000259|Pfam:PF13877"
FT   REGION          30..58
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          236..314
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        38..58
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        255..299
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   467 AA;  52960 MW;  227D798238CA9198 CRC64;
     MSTTPSKHGR DLTQGFLNDL QDWELSFKDK DKKIKQQQPT HFSNLTSEKF RPSGSGQYDF
     AKNYAQVNDE SQLDANSEKE QGNEFFKQKK FNEAIDCYSR SIALSPNAVA YANRAMAYLK
     IKRYREAEVD CTEALNLDDR YIKAYSRRAT ARKELGMLKE AKEDAEFALR LEPQSQELKK
     QYADIKSFLE KEIIQKATGA MQSTAQELLK TAGLKKKTKM PNTEMNLKPV TLEAKTNGDM
     VRPVSGSKES SGKKLIENVQ PEEKNNEGSR KIPAITEHVD SKKVTPRSLA YETEARSSDR
     NSTRPSGLGN QVSKKVELKP SVQELATHAA SLAVAEVSKN IKAPKSAYEF ENFWRSFLGD
     RALQTQLLKV MNPSSLPQIF KNALTSPVLV DILKCVALFF AEDMDLAVKY IENLTKVPRF
     NMIVMCLTST EKNELLMIWN DVFCNKATPV EHAEVLDKLR SRYYLKQ
//
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