ID A0A087GFK3_ARAAL Unreviewed; 483 AA.
AC A0A087GFK3;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 33.
DE RecName: Full=SET domain-containing protein {ECO:0000259|PROSITE:PS50280};
GN OrderedLocusNames=AALP_Aa7g027900 {ECO:0000313|EMBL:KFK28655.1};
OS Arabis alpina (Alpine rock-cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis.
OX NCBI_TaxID=50452 {ECO:0000313|EMBL:KFK28655.1, ECO:0000313|Proteomes:UP000029120};
RN [1] {ECO:0000313|Proteomes:UP000029120}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Pajares {ECO:0000313|Proteomes:UP000029120};
RX PubMed=27246759; DOI=10.1038/nplants.2014.23;
RA Willing E.M., Rawat V., Mandakova T., Maumus F., James G.V.,
RA Nordstroem K.J., Becker C., Warthmann N., Chica C., Szarzynska B.,
RA Zytnicki M., Albani M.C., Kiefer C., Bergonzi S., Castaings L.,
RA Mateos J.L., Berns M.C., Bujdoso N., Piofczyk T., de Lorenzo L.,
RA Barrero-Sicilia C., Mateos I., Piednoel M., Hagmann J., Chen-Min-Tao R.,
RA Iglesias-Fernandez R., Schuster S.C., Alonso-Blanco C., Roudier F.,
RA Carbonero P., Paz-Ares J., Davis S.J., Pecinka A., Quesneville H.,
RA Colot V., Lysak M.A., Weigel D., Coupland G., Schneeberger K.;
RT "Genome expansion of Arabis alpina linked with retrotransposition and
RT reduced symmetric DNA methylation.";
RL Nat. Plants 1:14023-14023(2015).
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DR EMBL; CM002875; KFK28655.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A087GFK3; -.
DR EnsemblPlants; KFK28655; KFK28655; AALP_AA7G027900.
DR Gramene; KFK28655; KFK28655; AALP_AA7G027900.
DR eggNOG; KOG1337; Eukaryota.
DR OMA; MRAYGVQ; -.
DR OrthoDB; 314998at2759; -.
DR Proteomes; UP000029120; Chromosome 7.
DR GO; GO:0009534; C:chloroplast thylakoid; IEA:EnsemblPlants.
DR GO; GO:0000427; C:plastid-encoded plastid RNA polymerase complex; IEA:EnsemblPlants.
DR GO; GO:0009658; P:chloroplast organization; IEA:EnsemblPlants.
DR GO; GO:0042793; P:plastid transcription; IEA:EnsemblPlants.
DR GO; GO:0009735; P:response to cytokinin; IEA:EnsemblPlants.
DR GO; GO:0009416; P:response to light stimulus; IEA:EnsemblPlants.
DR GO; GO:0010027; P:thylakoid membrane organization; IEA:EnsemblPlants.
DR CDD; cd10527; SET_LSMT; 1.
DR Gene3D; 3.90.1420.10; Rubisco LSMT, substrate-binding domain; 1.
DR Gene3D; 3.90.1410.10; set domain protein methyltransferase, domain 1; 1.
DR InterPro; IPR015353; Rubisco_LSMT_subst-bd.
DR InterPro; IPR036464; Rubisco_LSMT_subst-bd_sf.
DR InterPro; IPR001214; SET_dom.
DR InterPro; IPR046341; SET_dom_sf.
DR PANTHER; PTHR13271:SF54; PROTEIN PLASTID TRANSCRIPTIONALLY ACTIVE 14; 1.
DR PANTHER; PTHR13271; UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE; 1.
DR Pfam; PF09273; Rubis-subs-bind; 1.
DR Pfam; PF00856; SET; 1.
DR SUPFAM; SSF81822; RuBisCo LSMT C-terminal, substrate-binding domain; 1.
DR SUPFAM; SSF82199; SET domain; 1.
DR PROSITE; PS50280; SET; 1.
PE 4: Predicted;
KW Methyltransferase {ECO:0000256|ARBA:ARBA00022603};
KW Reference proteome {ECO:0000313|Proteomes:UP000029120};
KW S-adenosyl-L-methionine {ECO:0000256|ARBA:ARBA00022691};
KW Transferase {ECO:0000256|ARBA:ARBA00022679}.
FT DOMAIN 80..325
FT /note="SET"
FT /evidence="ECO:0000259|PROSITE:PS50280"
SQ SEQUENCE 483 AA; 55698 MW; C70E4CDA34229B66 CRC64;
MASSVFLHYL INTFISKPQG FCNGVISTPK PRTNFVRERQ NYVRPIKVAS LETQPFPLFQ
SPVSEETSSS ELEPADPDFY KIGYVRSVRA YGVEFKEGPD GFGVYASKDI EPRRRARVIM
EIPLELMITI RQKHPWMFFP DVVPIGHPIF DIINSTDPEI DWDLRLACLL LFSFDREDHF
WRLYGDFLPA VDECSSLLLA TEEDLAELQD PDLVTTIRQQ QKRVLEFWEK NWHSGVPLKI
KRLAEDPERF IWAVSIAQTR CISMLTRVGA LVQELNMMIP YADMLNHSFE PNCFLHWRPK
DRMLEVMSNA GQAIKKGEEM TINYMPGQKN DMLMERYGFS TPVNPWDAIK FSGDSRIHLD
SFLSIFNIFG LPEDYYHDSE LSGGDSFVDG AVLAAARTLA TWSDIDLPPI PSAERKAVKE
LQDECRKMLA EYPTTAEQDQ KMLDSISEAR TTFATAVKYR MHRKMFIGKI IKALDIYQER
LLF
//
