ID A0A087H948_ARAAL Unreviewed; 397 AA.
AC A0A087H948;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 24-JAN-2024, entry version 35.
DE RecName: Full=Pentacotripeptide-repeat region of PRORP domain-containing protein {ECO:0008006|Google:ProtNLM};
GN OrderedLocusNames=AALP_Aa3g142500 {ECO:0000313|EMBL:KFK38650.1};
OS Arabis alpina (Alpine rock-cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis.
OX NCBI_TaxID=50452 {ECO:0000313|EMBL:KFK38650.1, ECO:0000313|Proteomes:UP000029120};
RN [1] {ECO:0000313|Proteomes:UP000029120}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Pajares {ECO:0000313|Proteomes:UP000029120};
RX PubMed=27246759; DOI=10.1038/nplants.2014.23;
RA Willing E.M., Rawat V., Mandakova T., Maumus F., James G.V.,
RA Nordstroem K.J., Becker C., Warthmann N., Chica C., Szarzynska B.,
RA Zytnicki M., Albani M.C., Kiefer C., Bergonzi S., Castaings L.,
RA Mateos J.L., Berns M.C., Bujdoso N., Piofczyk T., de Lorenzo L.,
RA Barrero-Sicilia C., Mateos I., Piednoel M., Hagmann J., Chen-Min-Tao R.,
RA Iglesias-Fernandez R., Schuster S.C., Alonso-Blanco C., Roudier F.,
RA Carbonero P., Paz-Ares J., Davis S.J., Pecinka A., Quesneville H.,
RA Colot V., Lysak M.A., Weigel D., Coupland G., Schneeberger K.;
RT "Genome expansion of Arabis alpina linked with retrotransposition and
RT reduced symmetric DNA methylation.";
RL Nat. Plants 1:14023-14023(2015).
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DR EMBL; CM002871; KFK38650.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A087H948; -.
DR EnsemblPlants; KFK38650; KFK38650; AALP_AA3G142500.
DR Gramene; KFK38650; KFK38650; AALP_AA3G142500.
DR eggNOG; KOG4197; Eukaryota.
DR OMA; ILLNGFY; -.
DR OrthoDB; 396831at2759; -.
DR Proteomes; UP000029120; Chromosome 3.
DR GO; GO:0003729; F:mRNA binding; IEA:EnsemblPlants.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 4.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 5.
DR PANTHER; PTHR47936:SF5; -; 1.
DR PANTHER; PTHR47936; PPR_LONG DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF13041; PPR_2; 3.
DR PROSITE; PS51375; PPR; 5.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000029120};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 108..142
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 179..213
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 214..248
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 249..283
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 284..318
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 397 AA; 45298 MW; D6F0EC85C51627AC CRC64;
MSSLSRLLLR DTFSFRTITN RRLFSAVTAA SASRPATSER RPSLINLVNE ETDPKYITEK
FKKACQAEWF RKNISVYERT VRRLAAAKKF EWIQEILEEQ NKYPNMSKEG FVARIINLYG
RAGMFENAQK VFDEMTERNC KRSVLSFNAL LNACVNSKKF DLVEGIFKEL PGKLSIEPDI
ASYNTLIKGL CGKGSLPEAV ALVDEIEIKG LKPDHITYNI LLHESYKNGH FEQGEEIWGR
ILEKNVTRDI RSYNARLVGL AMEIKSEEMV KLFDELKANG IKPDVFTFTA MVRGFVAEGK
VAEAKIWYKE IEKNGCRPLK FIFSSLLPAM CKAGDLDSAF ELSKEIFSKR LLVEQAVLQE
VVDELVKGSK QDEAEELVEL AKTNDYLQFK LHLSSEE
//