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Database: UniProt
Entry: A0A087H948_ARAAL
LinkDB: A0A087H948_ARAAL
Original site: A0A087H948_ARAAL 
ID   A0A087H948_ARAAL        Unreviewed;       397 AA.
AC   A0A087H948;
DT   29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT   29-OCT-2014, sequence version 1.
DT   24-JAN-2024, entry version 35.
DE   RecName: Full=Pentacotripeptide-repeat region of PRORP domain-containing protein {ECO:0008006|Google:ProtNLM};
GN   OrderedLocusNames=AALP_Aa3g142500 {ECO:0000313|EMBL:KFK38650.1};
OS   Arabis alpina (Alpine rock-cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis.
OX   NCBI_TaxID=50452 {ECO:0000313|EMBL:KFK38650.1, ECO:0000313|Proteomes:UP000029120};
RN   [1] {ECO:0000313|Proteomes:UP000029120}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Pajares {ECO:0000313|Proteomes:UP000029120};
RX   PubMed=27246759; DOI=10.1038/nplants.2014.23;
RA   Willing E.M., Rawat V., Mandakova T., Maumus F., James G.V.,
RA   Nordstroem K.J., Becker C., Warthmann N., Chica C., Szarzynska B.,
RA   Zytnicki M., Albani M.C., Kiefer C., Bergonzi S., Castaings L.,
RA   Mateos J.L., Berns M.C., Bujdoso N., Piofczyk T., de Lorenzo L.,
RA   Barrero-Sicilia C., Mateos I., Piednoel M., Hagmann J., Chen-Min-Tao R.,
RA   Iglesias-Fernandez R., Schuster S.C., Alonso-Blanco C., Roudier F.,
RA   Carbonero P., Paz-Ares J., Davis S.J., Pecinka A., Quesneville H.,
RA   Colot V., Lysak M.A., Weigel D., Coupland G., Schneeberger K.;
RT   "Genome expansion of Arabis alpina linked with retrotransposition and
RT   reduced symmetric DNA methylation.";
RL   Nat. Plants 1:14023-14023(2015).
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DR   EMBL; CM002871; KFK38650.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A087H948; -.
DR   EnsemblPlants; KFK38650; KFK38650; AALP_AA3G142500.
DR   Gramene; KFK38650; KFK38650; AALP_AA3G142500.
DR   eggNOG; KOG4197; Eukaryota.
DR   OMA; ILLNGFY; -.
DR   OrthoDB; 396831at2759; -.
DR   Proteomes; UP000029120; Chromosome 3.
DR   GO; GO:0003729; F:mRNA binding; IEA:EnsemblPlants.
DR   Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 4.
DR   InterPro; IPR002885; Pentatricopeptide_rpt.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   NCBIfam; TIGR00756; PPR; 5.
DR   PANTHER; PTHR47936:SF5; -; 1.
DR   PANTHER; PTHR47936; PPR_LONG DOMAIN-CONTAINING PROTEIN; 1.
DR   Pfam; PF13041; PPR_2; 3.
DR   PROSITE; PS51375; PPR; 5.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000029120};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT   REPEAT          108..142
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          179..213
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          214..248
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          249..283
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          284..318
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ   SEQUENCE   397 AA;  45298 MW;  D6F0EC85C51627AC CRC64;
     MSSLSRLLLR DTFSFRTITN RRLFSAVTAA SASRPATSER RPSLINLVNE ETDPKYITEK
     FKKACQAEWF RKNISVYERT VRRLAAAKKF EWIQEILEEQ NKYPNMSKEG FVARIINLYG
     RAGMFENAQK VFDEMTERNC KRSVLSFNAL LNACVNSKKF DLVEGIFKEL PGKLSIEPDI
     ASYNTLIKGL CGKGSLPEAV ALVDEIEIKG LKPDHITYNI LLHESYKNGH FEQGEEIWGR
     ILEKNVTRDI RSYNARLVGL AMEIKSEEMV KLFDELKANG IKPDVFTFTA MVRGFVAEGK
     VAEAKIWYKE IEKNGCRPLK FIFSSLLPAM CKAGDLDSAF ELSKEIFSKR LLVEQAVLQE
     VVDELVKGSK QDEAEELVEL AKTNDYLQFK LHLSSEE
//
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