GenomeNet

Database: UniProt
Entry: A0A087HNJ1_ARAAL
LinkDB: A0A087HNJ1_ARAAL
Original site: A0A087HNJ1_ARAAL 
ID   A0A087HNJ1_ARAAL        Unreviewed;       245 AA.
AC   A0A087HNJ1;
DT   29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT   29-OCT-2014, sequence version 1.
DT   24-JAN-2024, entry version 28.
DE   RecName: Full=PGG domain-containing protein {ECO:0000259|Pfam:PF13962};
GN   OrderedLocusNames=AALP_Aa1g160900 {ECO:0000313|EMBL:KFK43693.1};
OS   Arabis alpina (Alpine rock-cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis.
OX   NCBI_TaxID=50452 {ECO:0000313|EMBL:KFK43693.1, ECO:0000313|Proteomes:UP000029120};
RN   [1] {ECO:0000313|Proteomes:UP000029120}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Pajares {ECO:0000313|Proteomes:UP000029120};
RX   PubMed=27246759; DOI=10.1038/nplants.2014.23;
RA   Willing E.M., Rawat V., Mandakova T., Maumus F., James G.V.,
RA   Nordstroem K.J., Becker C., Warthmann N., Chica C., Szarzynska B.,
RA   Zytnicki M., Albani M.C., Kiefer C., Bergonzi S., Castaings L.,
RA   Mateos J.L., Berns M.C., Bujdoso N., Piofczyk T., de Lorenzo L.,
RA   Barrero-Sicilia C., Mateos I., Piednoel M., Hagmann J., Chen-Min-Tao R.,
RA   Iglesias-Fernandez R., Schuster S.C., Alonso-Blanco C., Roudier F.,
RA   Carbonero P., Paz-Ares J., Davis S.J., Pecinka A., Quesneville H.,
RA   Colot V., Lysak M.A., Weigel D., Coupland G., Schneeberger K.;
RT   "Genome expansion of Arabis alpina linked with retrotransposition and
RT   reduced symmetric DNA methylation.";
RL   Nat. Plants 1:14023-14023(2015).
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DR   EMBL; CM002869; KFK43693.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A087HNJ1; -.
DR   EnsemblPlants; KFK43693; KFK43693; AALP_AA1G160900.
DR   Gramene; KFK43693; KFK43693; AALP_AA1G160900.
DR   eggNOG; KOG0504; Eukaryota.
DR   OMA; PRCEREW; -.
DR   OrthoDB; 649178at2759; -.
DR   Proteomes; UP000029120; Chromosome 1.
DR   GO; GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
DR   Gene3D; 1.25.40.20; Ankyrin repeat-containing domain; 1.
DR   InterPro; IPR002110; Ankyrin_rpt.
DR   InterPro; IPR036770; Ankyrin_rpt-contain_sf.
DR   InterPro; IPR026961; PGG_dom.
DR   PANTHER; PTHR24128:SF55; ANKYRIN REPEAT FAMILY PROTEIN; 1.
DR   PANTHER; PTHR24128; HOMEOBOX PROTEIN WARIAI; 1.
DR   Pfam; PF00023; Ank; 1.
DR   Pfam; PF13962; PGG; 1.
DR   SUPFAM; SSF48403; Ankyrin repeat; 1.
DR   PROSITE; PS50297; ANK_REP_REGION; 1.
DR   PROSITE; PS50088; ANK_REPEAT; 1.
PE   4: Predicted;
KW   ANK repeat {ECO:0000256|ARBA:ARBA00023043, ECO:0000256|PROSITE-
KW   ProRule:PRU00023}; Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000029120};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM        161..180
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        200..220
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        227..244
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   REPEAT          57..79
FT                   /note="ANK"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00023"
FT   DOMAIN          158..223
FT                   /note="PGG"
FT                   /evidence="ECO:0000259|Pfam:PF13962"
SQ   SEQUENCE   245 AA;  28047 MW;  1E5C3044A7C1F484 CRC64;
     MYPRCEREWP KCFASCCGPV VNDRFEVLQV LTGWIQIMSQ RNARSIEYTV LNKKDLTDNT
     ALHLAAYKND HQVVRLLLEC RLVLRNEVNG DGLTFLDILR TQGKINESGD LEQVARKTGC
     KEAASLPKMM KPYDFLKSPI TFWTYCSTHT RRISSDTSEE ARGVFLIICT LIITATYQTA
     LQPPGGVNQT EGQAMMKQTF FIVIWVSNTI GFCCAIFYTF CLLPARGLLT FWFFYIGAYR
     LSWIL
//
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