ID A0A087WPJ5_MOUSE Unreviewed; 245 AA.
AC A0A087WPJ5;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 50.
DE SubName: Full=Collagen, type III, alpha 1 {ECO:0000313|Ensembl:ENSMUSP00000139802.2};
DE Flags: Fragment;
GN Name=Col3a1 {ECO:0000313|Ensembl:ENSMUSP00000139802.2,
GN ECO:0000313|MGI:MGI:88453};
OS Mus musculus (Mouse).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC Murinae; Mus; Mus.
OX NCBI_TaxID=10090 {ECO:0000313|Ensembl:ENSMUSP00000139802.2, ECO:0000313|Proteomes:UP000000589};
RN [1] {ECO:0000313|Ensembl:ENSMUSP00000139802.2, ECO:0000313|Proteomes:UP000000589}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=C57BL/6J {ECO:0000313|Ensembl:ENSMUSP00000139802.2,
RC ECO:0000313|Proteomes:UP000000589};
RX PubMed=19468303; DOI=10.1371/journal.pbio.1000112;
RA Church D.M., Goodstadt L., Hillier L.W., Zody M.C., Goldstein S., She X.,
RA Bult C.J., Agarwala R., Cherry J.L., DiCuccio M., Hlavina W., Kapustin Y.,
RA Meric P., Maglott D., Birtle Z., Marques A.C., Graves T., Zhou S.,
RA Teague B., Potamousis K., Churas C., Place M., Herschleb J., Runnheim R.,
RA Forrest D., Amos-Landgraf J., Schwartz D.C., Cheng Z., Lindblad-Toh K.,
RA Eichler E.E., Ponting C.P.;
RT "Lineage-specific biology revealed by a finished genome assembly of the
RT mouse.";
RL PLoS Biol. 7:E1000112-E1000112(2009).
RN [2] {ECO:0000313|Ensembl:ENSMUSP00000139802.2}
RP IDENTIFICATION.
RC STRAIN=C57BL/6J {ECO:0000313|Ensembl:ENSMUSP00000139802.2};
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
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DR AlphaFoldDB; A0A087WPJ5; -.
DR SMR; A0A087WPJ5; -.
DR jPOST; A0A087WPJ5; -.
DR ProteomicsDB; 347523; -.
DR Antibodypedia; 3392; 893 antibodies from 38 providers.
DR Ensembl; ENSMUST00000186021.2; ENSMUSP00000139802.2; ENSMUSG00000026043.19.
DR AGR; MGI:88453; -.
DR MGI; MGI:88453; Col3a1.
DR VEuPathDB; HostDB:ENSMUSG00000026043; -.
DR GeneTree; ENSGT00940000161229; -.
DR HOGENOM; CLU_1135724_0_0_1; -.
DR ChiTaRS; Col3a1; mouse.
DR Proteomes; UP000000589; Chromosome 1.
DR Bgee; ENSMUSG00000026043; Expressed in efferent duct and 275 other cell types or tissues.
DR ExpressionAtlas; A0A087WPJ5; baseline and differential.
DR GO; GO:0005581; C:collagen trimer; IEA:UniProtKB-KW.
DR GO; GO:0005201; F:extracellular matrix structural constituent; IEA:InterPro.
DR Gene3D; 2.60.120.1000; -; 1.
DR InterPro; IPR008160; Collagen.
DR InterPro; IPR000885; Fib_collagen_C.
DR NCBIfam; NF040941; GGGWT_bact; 1.
DR PANTHER; PTHR24023; COLLAGEN ALPHA; 1.
DR PANTHER; PTHR24023:SF604; COLLAGEN ALPHA-1(III) CHAIN; 1.
DR Pfam; PF01410; COLFI; 1.
DR Pfam; PF01391; Collagen; 1.
DR SMART; SM00038; COLFI; 1.
DR PROSITE; PS51461; NC1_FIB; 1.
PE 1: Evidence at protein level;
KW Collagen {ECO:0000256|ARBA:ARBA00023119};
KW Extracellular matrix {ECO:0000256|ARBA:ARBA00022530};
KW Proteomics identification {ECO:0007829|EPD:A0A087WPJ5,
KW ECO:0007829|MaxQB:A0A087WPJ5};
KW Reference proteome {ECO:0000313|Proteomes:UP000000589};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Secreted {ECO:0000256|ARBA:ARBA00022530}.
FT DOMAIN 97..245
FT /note="Fibrillar collagen NC1"
FT /evidence="ECO:0000259|PROSITE:PS51461"
FT REGION 1..62
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 46..60
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|Ensembl:ENSMUSP00000139802.2"
FT NON_TER 245
FT /evidence="ECO:0000313|Ensembl:ENSMUSP00000139802.2"
SQ SEQUENCE 245 AA; 25745 MW; A0C79478E4984A67 CRC64;
PTGSSGPAGP PGPQGVKGER GSPGPIGPPG PRGNRGERGS EGSPGHPGQP GPPGPPGAPG
PCCGGGAAAI AGVGGEKSGG FSPYYGDDPM DFKINTEEIM SSLKSVNGQI ESLISPDGSR
KNPARNCRDL KFCHPELKSG EYWVDPNQGC KMDAIKVFCN METGETCINA SPMTVPRKHW
WTDSGAEKKH VWFGESMNGG FQFSYGPPDL PEDVVDVQLA FLRLLSSRAS QNITYHCKNS
IAYMD
//
