ID A0A087YC97_POEFO Unreviewed; 682 AA.
AC A0A087YC97;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 24-JAN-2024, entry version 42.
DE RecName: Full=WD repeat-containing protein 48 {ECO:0000256|ARBA:ARBA00021209};
DE AltName: Full=USP1-associated factor 1 {ECO:0000256|ARBA:ARBA00031683};
OS Poecilia formosa (Amazon molly) (Limia formosa).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae;
OC Poecilia.
OX NCBI_TaxID=48698 {ECO:0000313|Ensembl:ENSPFOP00000015650.1, ECO:0000313|Proteomes:UP000028760};
RN [1] {ECO:0000313|Proteomes:UP000028760}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=female {ECO:0000313|Proteomes:UP000028760};
RA Schartl M., Warren W.;
RL Submitted (OCT-2013) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Ensembl:ENSPFOP00000015650.1}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (SEP-2023) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Late endosome {ECO:0000256|ARBA:ARBA00004603}.
CC -!- SIMILARITY: Belongs to the WD repeat WDR48 family.
CC {ECO:0000256|ARBA:ARBA00006917}.
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DR EMBL; AYCK01004979; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR AlphaFoldDB; A0A087YC97; -.
DR STRING; 48698.ENSPFOP00000015650; -.
DR Ensembl; ENSPFOT00000015672.1; ENSPFOP00000015650.1; ENSPFOG00000015559.1.
DR eggNOG; KOG0308; Eukaryota.
DR GeneTree; ENSGT00920000149157; -.
DR OMA; GQDENDC; -.
DR Proteomes; UP000028760; Unassembled WGS sequence.
DR GO; GO:0005770; C:late endosome; IEA:UniProtKB-SubCell.
DR CDD; cd17041; Ubl_WDR48; 1.
DR CDD; cd00200; WD40; 1.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 2.
DR InterPro; IPR020472; G-protein_beta_WD-40_rep.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR InterPro; IPR021772; WDR48/Bun107.
DR PANTHER; PTHR19862; WD REPEAT-CONTAINING PROTEIN 48; 1.
DR PANTHER; PTHR19862:SF14; WD REPEAT-CONTAINING PROTEIN 48; 1.
DR Pfam; PF11816; DUF3337; 1.
DR Pfam; PF00400; WD40; 6.
DR PRINTS; PR00320; GPROTEINBRPT.
DR SMART; SM00320; WD40; 7.
DR SUPFAM; SSF50978; WD40 repeat-like; 1.
DR PROSITE; PS00678; WD_REPEATS_1; 1.
DR PROSITE; PS50082; WD_REPEATS_2; 5.
DR PROSITE; PS50294; WD_REPEATS_REGION; 4.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000028760};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW ProRule:PRU00221}.
FT REPEAT 26..59
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 71..112
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 113..154
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 164..205
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 206..251
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REGION 613..635
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 682 AA; 76758 MW; 9869C173FF22ABA0 CRC64;
MATHHRQNAA GRRKVQVSYV IRDEVEKYNR NGVNALQLDP ALNRLFTAGR DSIIRIWSVY
QQKQDPYIAS MEHHTDWVND IVLCCNGKTL ISASSDTTVK VWNAHKGFCM STLRTHKDYV
KALAYAKDKE LVASAGLDRQ IFLWDVNTLT ALTASNNTVT TSSLSGNKDS IYSLAMNQMG
TVIVSGSTEK VLRVWDPRTC AKLMKLKGHT DNVKSLLLNR DGTQGSTQCL SGSSDGTIRL
WSLGQQRCIA TYRVHEEGVW ALQVNEAFTH VYSGGRDKKI YCTDLRNPDI RVLICEEKAP
VLKMELDRSA DPPPAIWVST TKSSVNKWSL KGMHNFRSSG EYDNDCTTPL TPLCTQPEQV
IKGGASIIQC HILNDKRHIL TKDTNNNVAY WDVLKACKGE DLGKVEFDEE IKKRFKMVYV
PNWFSVDLKT GMLTITLDES DCFAAWVSAK DAGFSSSDGS DPKLNLGGLL LQALLEFWPR
TRINPMDEEE NEVNHAVNGE QENRVQKGNG YFQVPPHTPV IFGEAGGRTL FRLLCRDSGG
ETESMLLNET VPQWVIDITV DKNMPKFNKI PFYLQPHSSS GAKTLKKDRL SASDMLQVRK
VMEHVYEKII NLDNESQTTS SSANDKPGEQ EKEEDMAMLA EEKIELMCQD QVLDPNMDLR
TVKHFIWKSG GDLTLHYRQK ST
//