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Database: UniProt
Entry: A0A087YC97_POEFO
LinkDB: A0A087YC97_POEFO
Original site: A0A087YC97_POEFO 
ID   A0A087YC97_POEFO        Unreviewed;       682 AA.
AC   A0A087YC97;
DT   29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT   29-OCT-2014, sequence version 1.
DT   24-JAN-2024, entry version 42.
DE   RecName: Full=WD repeat-containing protein 48 {ECO:0000256|ARBA:ARBA00021209};
DE   AltName: Full=USP1-associated factor 1 {ECO:0000256|ARBA:ARBA00031683};
OS   Poecilia formosa (Amazon molly) (Limia formosa).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC   Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae;
OC   Poecilia.
OX   NCBI_TaxID=48698 {ECO:0000313|Ensembl:ENSPFOP00000015650.1, ECO:0000313|Proteomes:UP000028760};
RN   [1] {ECO:0000313|Proteomes:UP000028760}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=female {ECO:0000313|Proteomes:UP000028760};
RA   Schartl M., Warren W.;
RL   Submitted (OCT-2013) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|Ensembl:ENSPFOP00000015650.1}
RP   IDENTIFICATION.
RG   Ensembl;
RL   Submitted (SEP-2023) to UniProtKB.
CC   -!- SUBCELLULAR LOCATION: Late endosome {ECO:0000256|ARBA:ARBA00004603}.
CC   -!- SIMILARITY: Belongs to the WD repeat WDR48 family.
CC       {ECO:0000256|ARBA:ARBA00006917}.
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DR   EMBL; AYCK01004979; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   AlphaFoldDB; A0A087YC97; -.
DR   STRING; 48698.ENSPFOP00000015650; -.
DR   Ensembl; ENSPFOT00000015672.1; ENSPFOP00000015650.1; ENSPFOG00000015559.1.
DR   eggNOG; KOG0308; Eukaryota.
DR   GeneTree; ENSGT00920000149157; -.
DR   OMA; GQDENDC; -.
DR   Proteomes; UP000028760; Unassembled WGS sequence.
DR   GO; GO:0005770; C:late endosome; IEA:UniProtKB-SubCell.
DR   CDD; cd17041; Ubl_WDR48; 1.
DR   CDD; cd00200; WD40; 1.
DR   Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 2.
DR   InterPro; IPR020472; G-protein_beta_WD-40_rep.
DR   InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR   InterPro; IPR019775; WD40_repeat_CS.
DR   InterPro; IPR036322; WD40_repeat_dom_sf.
DR   InterPro; IPR001680; WD40_rpt.
DR   InterPro; IPR021772; WDR48/Bun107.
DR   PANTHER; PTHR19862; WD REPEAT-CONTAINING PROTEIN 48; 1.
DR   PANTHER; PTHR19862:SF14; WD REPEAT-CONTAINING PROTEIN 48; 1.
DR   Pfam; PF11816; DUF3337; 1.
DR   Pfam; PF00400; WD40; 6.
DR   PRINTS; PR00320; GPROTEINBRPT.
DR   SMART; SM00320; WD40; 7.
DR   SUPFAM; SSF50978; WD40 repeat-like; 1.
DR   PROSITE; PS00678; WD_REPEATS_1; 1.
DR   PROSITE; PS50082; WD_REPEATS_2; 5.
DR   PROSITE; PS50294; WD_REPEATS_REGION; 4.
PE   3: Inferred from homology;
KW   Reference proteome {ECO:0000313|Proteomes:UP000028760};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737};
KW   WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW   ProRule:PRU00221}.
FT   REPEAT          26..59
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT   REPEAT          71..112
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT   REPEAT          113..154
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT   REPEAT          164..205
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT   REPEAT          206..251
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT   REGION          613..635
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   682 AA;  76758 MW;  9869C173FF22ABA0 CRC64;
     MATHHRQNAA GRRKVQVSYV IRDEVEKYNR NGVNALQLDP ALNRLFTAGR DSIIRIWSVY
     QQKQDPYIAS MEHHTDWVND IVLCCNGKTL ISASSDTTVK VWNAHKGFCM STLRTHKDYV
     KALAYAKDKE LVASAGLDRQ IFLWDVNTLT ALTASNNTVT TSSLSGNKDS IYSLAMNQMG
     TVIVSGSTEK VLRVWDPRTC AKLMKLKGHT DNVKSLLLNR DGTQGSTQCL SGSSDGTIRL
     WSLGQQRCIA TYRVHEEGVW ALQVNEAFTH VYSGGRDKKI YCTDLRNPDI RVLICEEKAP
     VLKMELDRSA DPPPAIWVST TKSSVNKWSL KGMHNFRSSG EYDNDCTTPL TPLCTQPEQV
     IKGGASIIQC HILNDKRHIL TKDTNNNVAY WDVLKACKGE DLGKVEFDEE IKKRFKMVYV
     PNWFSVDLKT GMLTITLDES DCFAAWVSAK DAGFSSSDGS DPKLNLGGLL LQALLEFWPR
     TRINPMDEEE NEVNHAVNGE QENRVQKGNG YFQVPPHTPV IFGEAGGRTL FRLLCRDSGG
     ETESMLLNET VPQWVIDITV DKNMPKFNKI PFYLQPHSSS GAKTLKKDRL SASDMLQVRK
     VMEHVYEKII NLDNESQTTS SSANDKPGEQ EKEEDMAMLA EEKIELMCQD QVLDPNMDLR
     TVKHFIWKSG GDLTLHYRQK ST
//
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