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Database: UniProt
Entry: A0A090L2L2_STRRB
LinkDB: A0A090L2L2_STRRB
Original site: A0A090L2L2_STRRB 
ID   A0A090L2L2_STRRB        Unreviewed;       885 AA.
AC   A0A090L2L2;
DT   26-NOV-2014, integrated into UniProtKB/TrEMBL.
DT   26-NOV-2014, sequence version 1.
DT   24-JAN-2024, entry version 44.
DE   SubName: Full=Vacuolar protein sorting-associated protein 41 homolog {ECO:0000313|EMBL:CEF63947.1, ECO:0000313|WBParaSite:SRAE_1000220300.1};
GN   ORFNames=SRAE_1000220300 {ECO:0000313|EMBL:CEF63947.1,
GN   ECO:0000313|WBParaSite:SRAE_1000220300.1,
GN   ECO:0000313|WormBase:SRAE_1000220300};
OS   Strongyloides ratti (Parasitic roundworm).
OC   Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC   Tylenchina; Panagrolaimomorpha; Strongyloidoidea; Strongyloididae;
OC   Strongyloides.
OX   NCBI_TaxID=34506 {ECO:0000313|EMBL:CEF63947.1};
RN   [1] {ECO:0000313|EMBL:CEF63947.1, ECO:0000313|Proteomes:UP000035682}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=ED321 {ECO:0000313|Proteomes:UP000035682,
RC   ECO:0000313|WBParaSite:SRAE_1000220300.1}, and ED321 Heterogonic
RC   {ECO:0000313|EMBL:CEF63947.1};
RA   Martin A.A.;
RL   Submitted (SEP-2014) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|WBParaSite:SRAE_1000220300.1}
RP   IDENTIFICATION.
RG   WormBaseParasite;
RL   Submitted (DEC-2020) to UniProtKB.
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DR   EMBL; LN609528; CEF63947.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A090L2L2; -.
DR   STRING; 34506.A0A090L2L2; -.
DR   EnsemblMetazoa; SRAE_1000220300.1; SRAE_1000220300.1; WBGene00258817.
DR   WBParaSite; SRAE_1000220300.1; SRAE_1000220300.1; WBGene00258817.
DR   WormBase; SRAE_1000220300; SRP01966; WBGene00258817; -.
DR   OMA; KFKYQRI; -.
DR   OrthoDB; 8838at2759; -.
DR   Proteomes; UP000035682; Chromosome X.
DR   GO; GO:0006623; P:protein targeting to vacuole; IEA:InterPro.
DR   GO; GO:0016192; P:vesicle-mediated transport; IEA:InterPro.
DR   Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 1.
DR   Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 1.
DR   InterPro; IPR000547; Clathrin_H-chain/VPS_repeat.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   InterPro; IPR045111; Vps41/Vps8.
DR   InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR   InterPro; IPR036322; WD40_repeat_dom_sf.
DR   PANTHER; PTHR12616; VACUOLAR PROTEIN SORTING VPS41; 1.
DR   PANTHER; PTHR12616:SF1; VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 41 HOMOLOG; 1.
DR   Pfam; PF00637; Clathrin; 1.
DR   SMART; SM00299; CLH; 1.
DR   SUPFAM; SSF50978; WD40 repeat-like; 1.
DR   PROSITE; PS50236; CHCR; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000035682}.
FT   REPEAT          633..785
FT                   /note="CHCR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU01006"
SQ   SEQUENCE   885 AA;  101857 MW;  43D6294B47820A7D CRC64;
     MNEQKNNLLN IRNNSFCQST LSNGDSTLSE SYIDTYGNYN PENSSVEDTV FADGEPRLNY
     ERILGDLGQC FSSQSPTAVT FSDRFIAAGF KMGYILLFDY SGLGHKEIPT RKHNAKIICL
     SFDDKSDYLG SLSSDGMLSV FGLVSSTLNV ILNLREVPTT ICLSPDYSVQ GKGAKLVIGG
     RSLNLYKKGL LSGKFDKLYG DDFMRGGIIT TISWKKSILA FTNCEGTRIY DFRINQIVTK
     LDVEPNISRS PLLTYQPIHL WLNDKTLIVG WLNCLTYYKM KEHNIVKGIE VLKKIEIAKN
     YKFEDNFMIA GISYMQNDIV SERNPEIILY GMYKDDTISR CESLASLSAP PPSVITTDAE
     NFIGKVNVKI IKCLTKTDFM ITAEDIIDMN GVLPNQLHRL KMFGIPYDKE YYLLGDRCLI
     KAIATTLNER LDWRVENDLL FEAVEFAKQY KSLLDRESVI HVGRKLMEKL LRESDYITAS
     DHLSIICNKD KSEWKYMFNI YRMEGILYLF SYAMSSDKPI LEKEYYQEVI EDALNKNASI
     FRRIVETWDK NLYNYKDIIE KLKINLGKLP KDNTPEINII RKHFLLSIAR LSTYDKDYEL
     AADIYINACD KFIFNWIGQN NVYSIIKERL PELMNISKYD TIQLIFDNEA DPKTVLFELR
     GYPDYQLDFL LALFERGDGA EYGNLAVELF VRCRKEKLLH FLQTNDNYII REATNICRRE
     KMYEELIYLL SRSGFESLKE AIEIIVNEFN DINRAIKFCK ENHGDGELWG YLLSFCNQTP
     QIVKDILEQA GTSIDPLTIV ENIDEKLEIP ELTLSLIRLI KACEIEIDNM EIGLKILTKD
     INQKYDSCIS KKPAFVDIIP GINYDKPIAV TFGEFNDSYE EIEEL
//
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