ID A0A090LFU9_STRRB Unreviewed; 192 AA.
AC A0A090LFU9;
DT 26-NOV-2014, integrated into UniProtKB/TrEMBL.
DT 26-NOV-2014, sequence version 1.
DT 27-MAR-2024, entry version 50.
DE SubName: Full=Small nuclear ribonucleoprotein-associated protein B {ECO:0000313|EMBL:CEF67023.1, ECO:0000313|WBParaSite:SRAE_2000168800.1};
GN ORFNames=SRAE_2000168800 {ECO:0000313|EMBL:CEF67023.1,
GN ECO:0000313|WBParaSite:SRAE_2000168800.1,
GN ECO:0000313|WormBase:SRAE_2000168800};
OS Strongyloides ratti (Parasitic roundworm).
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Tylenchina; Panagrolaimomorpha; Strongyloidoidea; Strongyloididae;
OC Strongyloides.
OX NCBI_TaxID=34506 {ECO:0000313|EMBL:CEF67023.1};
RN [1] {ECO:0000313|EMBL:CEF67023.1, ECO:0000313|Proteomes:UP000035682}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=ED321 {ECO:0000313|Proteomes:UP000035682,
RC ECO:0000313|WBParaSite:SRAE_2000168800.1}, and ED321 Heterogonic
RC {ECO:0000313|EMBL:CEF67023.1};
RA Martin A.A.;
RL Submitted (SEP-2014) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|WBParaSite:SRAE_2000168800.1}
RP IDENTIFICATION.
RG WormBaseParasite;
RL Submitted (DEC-2020) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the snRNP SmB/SmN family.
CC {ECO:0000256|ARBA:ARBA00009123}.
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DR EMBL; LN609529; CEF67023.1; -; Genomic_DNA.
DR STRING; 34506.A0A090LFU9; -.
DR EnsemblMetazoa; SRAE_2000168800.1; SRAE_2000168800.1; WBGene00261894.
DR WBParaSite; SRAE_2000168800.1; SRAE_2000168800.1; WBGene00261894.
DR WormBase; SRAE_2000168800; SRP11937; WBGene00261894; -.
DR eggNOG; KOG3168; Eukaryota.
DR OMA; HMNILLC; -.
DR OrthoDB; 5475294at2759; -.
DR Proteomes; UP000035682; Chromosome X.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProt.
DR GO; GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR CDD; cd01717; Sm_B; 1.
DR Gene3D; 2.30.30.100; -; 1.
DR InterPro; IPR010920; LSM_dom_sf.
DR InterPro; IPR047575; Sm.
DR InterPro; IPR001163; Sm_dom_euk/arc.
DR InterPro; IPR017131; snRNP-assoc_SmB/SmN.
DR PANTHER; PTHR10701:SF0; SMALL NUCLEAR RIBONUCLEOPROTEIN-ASSOCIATED PROTEIN B; 1.
DR PANTHER; PTHR10701; SMALL NUCLEAR RIBONUCLEOPROTEIN-ASSOCIATED PROTEIN B AND N; 1.
DR Pfam; PF01423; LSM; 1.
DR PIRSF; PIRSF037187; snRNP_SmB/SmN; 2.
DR SMART; SM00651; Sm; 1.
DR SUPFAM; SSF50182; Sm-like ribonucleoproteins; 1.
DR PROSITE; PS52002; SM; 1.
PE 3: Inferred from homology;
KW mRNA processing {ECO:0000256|ARBA:ARBA00022664};
KW mRNA splicing {ECO:0000256|ARBA:ARBA00023187};
KW Reference proteome {ECO:0000313|Proteomes:UP000035682};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Ribonucleoprotein {ECO:0000256|ARBA:ARBA00023274,
KW ECO:0000313|EMBL:CEF67023.1}; Spliceosome {ECO:0000256|ARBA:ARBA00022728}.
FT DOMAIN 4..87
FT /note="Sm"
FT /evidence="ECO:0000259|PROSITE:PS52002"
FT REGION 139..192
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 144..192
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 192 AA; 20793 MW; 5609DE66449766E3 CRC64;
MTLGKNNKMM AHLNHRMRVI FQDSRVFIGY FKAFDKHMNI ILVDCEEIRK IKAKNGQKTG
DREEKRVLGL VLLRGEQIVS MNVDGPPARE DDPLKFLRTA GARGGPGVAN PAQRPMGMPG
VVPQQPVPGL QGPVRGMGGP APPIMQPQFI PPPIGQLPPG QLQPGQIPPG QIPPGQLPPG
QIPPGPPQNQ NF
//
