ID A0A090MZN9_STRRB Unreviewed; 301 AA.
AC A0A090MZN9;
DT 26-NOV-2014, integrated into UniProtKB/TrEMBL.
DT 26-NOV-2014, sequence version 1.
DT 27-MAR-2024, entry version 44.
DE SubName: Full=Collagen alpha-5(IV) chain {ECO:0000313|EMBL:CEF69264.1, ECO:0000313|WBParaSite:SRAE_2000391400.1};
GN ORFNames=SRAE_2000391400 {ECO:0000313|EMBL:CEF69264.1,
GN ECO:0000313|WBParaSite:SRAE_2000391400.1,
GN ECO:0000313|WormBase:SRAE_2000391400};
OS Strongyloides ratti (Parasitic roundworm).
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Tylenchina; Panagrolaimomorpha; Strongyloidoidea; Strongyloididae;
OC Strongyloides.
OX NCBI_TaxID=34506 {ECO:0000313|EMBL:CEF69264.1};
RN [1] {ECO:0000313|EMBL:CEF69264.1, ECO:0000313|Proteomes:UP000035682}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=ED321 {ECO:0000313|Proteomes:UP000035682,
RC ECO:0000313|WBParaSite:SRAE_2000391400.1}, and ED321 Heterogonic
RC {ECO:0000313|EMBL:CEF69264.1};
RA Martin A.A.;
RL Submitted (SEP-2014) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|WBParaSite:SRAE_2000391400.1}
RP IDENTIFICATION.
RG WormBaseParasite;
RL Submitted (DEC-2020) to UniProtKB.
CC -!- SUBUNIT: Collagen polypeptide chains are complexed within the cuticle
CC by disulfide bonds and other types of covalent cross-links.
CC {ECO:0000256|ARBA:ARBA00011518}.
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DR EMBL; LN609529; CEF69264.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A090MZN9; -.
DR STRING; 34506.A0A090MZN9; -.
DR EnsemblMetazoa; SRAE_2000391400.1; SRAE_2000391400.1; WBGene00264141.
DR WBParaSite; SRAE_2000391400.1; SRAE_2000391400.1; WBGene00264141.
DR WormBase; SRAE_2000391400; SRP05917; WBGene00264141; -.
DR OMA; FMKANSG; -.
DR OrthoDB; 2883480at2759; -.
DR Proteomes; UP000035682; Chromosome X.
DR GO; GO:0005581; C:collagen trimer; IEA:UniProtKB-KW.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0042302; F:structural constituent of cuticle; IEA:InterPro.
DR GO; GO:0048856; P:anatomical structure development; IEA:UniProt.
DR InterPro; IPR002486; Col_cuticle_N.
DR InterPro; IPR008160; Collagen.
DR PANTHER; PTHR24637:SF275; COL_CUTICLE_N DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR24637; COLLAGEN; 1.
DR Pfam; PF01484; Col_cuticle_N; 1.
DR Pfam; PF01391; Collagen; 1.
DR SMART; SM01088; Col_cuticle_N; 1.
PE 4: Predicted;
KW Collagen {ECO:0000313|EMBL:CEF69264.1};
KW Disulfide bond {ECO:0000256|ARBA:ARBA00023157};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000035682};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 12..36
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 12..64
FT /note="Nematode cuticle collagen N-terminal"
FT /evidence="ECO:0000259|SMART:SM01088"
FT REGION 108..283
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 108..164
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 183..203
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 219..244
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 301 AA; 29565 MW; 6E749B81FB8180CE CRC64;
MEGDSKIRAY RFVAYSAVTF SVIAVLSVAL SLPMVYNYVN AVKHQMKHEI GFCQGTAKDM
YNEVSYLKTI NFAARNRTAR QASGYDAPVE NAPAAATCEG CCLPGQPGPQ GPPGKSGKPG
KPGAPGTPGT PGKPPVAPCE PTTPPPCKPC PTGPPGPPGP IGAPGDVGAP GTPGRPGNDA
PNGEPGPRGP PGPPGPPGPQ GPKGDAGVPA VSEPAVPGEP GEPGEPGPQG PPGPPGPPGN
DGAPGAPGPK GETGEPGDAG PDGNPGPQGP PGPAGEPGEK GICPKYCALD GGIFFEDGTR
R
//
