ID A0A090N4A7_OSTTA Unreviewed; 1774 AA.
AC A0A090N4A7; A0A1Y5I965; A0A454XN29;
DT 26-NOV-2014, integrated into UniProtKB/TrEMBL.
DT 26-NOV-2014, sequence version 1.
DT 24-JAN-2024, entry version 38.
DE SubName: Full=Helicase, C-terminal {ECO:0000313|EMBL:CEF99538.1};
DE SubName: Full=Putative SNF2 domain-containing protein {ECO:0000313|EMBL:OUS43545.1};
GN ORFNames=BE221DRAFT_194449 {ECO:0000313|EMBL:OUS43545.1},
GN OT_ostta11g00460 {ECO:0000313|EMBL:CEF99538.1};
OS Ostreococcus tauri.
OC Eukaryota; Viridiplantae; Chlorophyta; Mamiellophyceae; Mamiellales;
OC Bathycoccaceae; Ostreococcus.
OX NCBI_TaxID=70448 {ECO:0000313|EMBL:CEF99538.1, ECO:0000313|Proteomes:UP000009170};
RN [1] {ECO:0000313|Proteomes:UP000009170}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=OTTH0595 {ECO:0000313|Proteomes:UP000009170};
RX PubMed=16868079; DOI=10.1073/pnas.0604795103;
RA Derelle E., Ferraz C., Rombauts S., Rouze P., Worden A.Z., Robbens S.,
RA Partensky F., Degroeve S., Echeynie S., Cooke R., Saeys Y., Wuyts J.,
RA Jabbari K., Bowler C., Panaud O., Piegu B., Ball S.G., Ral J.-P.,
RA Bouget F.-Y., Piganeau G., De Baets B., Picard A., Delseny M., Demaille J.,
RA Van de Peer Y., Moreau H.;
RT "Genome analysis of the smallest free-living eukaryote Ostreococcus tauri
RT unveils many unique features.";
RL Proc. Natl. Acad. Sci. U.S.A. 103:11647-11652(2006).
RN [2] {ECO:0000313|EMBL:CEF99538.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=RCC4221 {ECO:0000313|EMBL:CEF99538.1};
RA Derelle E., Ferraz C., Rombauts S., Rouze P., Worden A.Z., Robbens S.,
RA Partensky F., Degroeve S., Echeynie S., Cooke R., Saeys Y., Wuyts J.,
RA Jabbari K., Bowler C., Panaud O., Piegu B., Ball S., Ral J.P., Bouget F.Y.,
RA Piganeau G., De Baets B., Picard A., Delseny M., Demaille J.,
RA Van de Peer Y., Moreau H.;
RT "Genome analysis of the smallest free-living eukaryote Ostreococcus tauri
RT unveils many unique features.";
RL Proc. Natl. Acad. Sci. U.S.A. 131:11647-11652(2006).
RN [3] {ECO:0000313|EMBL:CEF99538.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=RCC4221 {ECO:0000313|EMBL:CEF99538.1};
RX PubMed=25494611; DOI=10.1186/1471-2164-15-1103;
RA Blanc-Mathieu R., Verhelst B., Derelle E., Rombauts S., Bouget F.Y.,
RA Carre I., Chateau A., Eyre-Walker A., Grimsley N., Moreau H., Piegu B.,
RA Rivals E., Schackwitz W., Van de Peer Y., Piganeau G.;
RT "An improved genome of the model marine alga Ostreococcus tauri unfolds by
RT assessing Illumina de novo assemblies.";
RL BMC Genomics 15:1103-1103(2014).
RN [4] {ECO:0000313|EMBL:OUS43545.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=RCC 1115 {ECO:0000313|EMBL:OUS43545.1};
RG DOE Joint Genome Institute;
RA Blanc-Mathieu R., Krasovec M., Hebrard M., Yau S., Desgranges E.,
RA Martin J., Schackwitz W., Kuo A., Salin G., Donnadieu C., Desdevises Y.,
RA Sanchez-Ferandin S., Moreau H., Rivals E., Grigoriev I.V., Grimsley N.,
RA Eyre-Walker A., Piganeau G.;
RT "Population genomics of picophytoplankton unveils novel chromosome
RT hypervariability.";
RL Submitted (APR-2017) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CAID01000011; CEF99538.1; -; Genomic_DNA.
DR EMBL; KZ155831; OUS43545.1; -; Genomic_DNA.
DR STRING; 70448.A0A090N4A7; -.
DR InParanoid; A0A090N4A7; -.
DR OrthoDB; 180798at2759; -.
DR Proteomes; UP000009170; Chromosome 11.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0140658; F:ATP-dependent chromatin remodeler activity; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
DR GO; GO:0017025; F:TBP-class protein binding; IEA:InterPro.
DR CDD; cd18793; SF2_C_SNF; 1.
DR Gene3D; 1.25.10.10; Leucine-rich Repeat Variant; 2.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 3.40.50.10810; Tandem AAA-ATPase domain; 1.
DR InterPro; IPR011989; ARM-like.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR044972; Mot1.
DR InterPro; IPR022707; Mot1_central_dom.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR038718; SNF2-like_sf.
DR InterPro; IPR000330; SNF2_N.
DR PANTHER; PTHR36498; TATA-BINDING PROTEIN-ASSOCIATED FACTOR 172; 1.
DR PANTHER; PTHR36498:SF1; TATA-BINDING PROTEIN-ASSOCIATED FACTOR 172; 1.
DR Pfam; PF12054; DUF3535; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF00176; SNF2-rel_dom; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF48371; ARM repeat; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Helicase {ECO:0000313|EMBL:CEF99538.1};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000009170};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT DOMAIN 1212..1380
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 1535..1705
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT REGION 88..111
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 243..286
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 246..273
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1774 AA; 191697 MW; CC480E840854C753 CRC64;
MASAESGGSR LDRLIKLIDT GSTADARREA ARQIGELAES HPLQLAGLLR RLRTHLRSKK
WETRTAASAT MSEIASRLKH PTVEDLERTE KEFEHSAVKV ETSSGRAGEG PTFDKSDALD
LTFAKFDVER VLEKAGILLS ASGAAFTLEH GPGTKAERLA QAKASLKRRL GMELGPEAGA
MMDENMKMSD LVKDEDLLDD GKVTVKEKVA VGDSAAEAVD GLTGDVDYSH LSARELNKLK
RKAKRMLREG HDPADAKRSK KDEEEARLER ERAEAEEDDE EQAEVAAGGW PLSRTCESLA
YMMFSEGWEE RHGAAAALRE VLRHQAACAA VWAPPPGVKL EPGTVEAARD ANAHWLEDMC
VRLLCILALD RFGDFAGDGA VAPVRETSAQ ALGAALLPLS PAAVDAVVAC TLTLLSRPEW
EVRHSALLAL KYILAAKSEL ALDLLPAALP AAIKALVDAD DDVRGAAAES LLPAAEHLPT
HPKFNELLHS LWNLLNELDD LSPSAVPVMK LIAKLYALES TRTASAVELS EVVPRLWPFA
AHPIAAVRFA VWQTLCRLLT VEPDSSKALW VQEACAPAMR HALQGALLDV DVASAEAAKE
AWLALLRTVP IAIIEATFMV HGGKWFELVT TVTNARAEGK LIFVSTPPSV KGEIRAVAKD
WPAGTVGRMR GLDCLAHLAS EFGKQNRASS VERTEQHTVT MLTAEHATAR LAGAYLLTFW
LRNVPPGPQR PTLQAPGGQL GLILANTNPA YPSAPSPTPY GEVAQMVKYV KSESMAFLRV
AATNGVSVTG EVPSPEADGF GADSASTLSA AVPQTDKEAV ESARSSLHAS VQRLRDTESR
LHGSVLASAA GAAISFGALP PKLNPFIQPL MASVRRERDV ELQRRAAASV AAMMKICVTR
TPSPNDKLMK NVTAMVCGDE AETPKAGSTE DIDEEELAAA KKKKTKSVAG IVEEETISDA
AVARLGGEAV IRAVSSTFGA DALAQISAFQ TLLIKPITQA PPESASPEAL QTLIDALQLL
KVLGPEVHVS LEPKIIDLTK AAFPAALYGD VAVRKTAAKT VATIASKHPE QVIPALLDFI
VPKLEQGEAA SQTWKRSGAV GLASELVKHL GSALAPYCVL LLVPLMGRMS DPDLRIRGLA
TRAFANLVPL LPLAAGKPPV DALTHKQKER SIKDGEFLEA LLDNSKIEDF KLPFKCARTL
RPYQQDGVNW LAFLRRFKLH GALADDMGLG KTLQSTCILA ATTVERKRDG LKKLPHLVIC
PTTLVSHWAY EISLYVEPDV LRPLEYQGSP PERLALQKDF GKYDIVIMSY ESLRADFNTL
DSFDWCYCVL DEGHAIRNPK SRVTQAVKKV RAEHRLLLSG TPIQNDVVEL WSLFDFLMPG
FLGTEREFKS TYGIAAARSA AAKKGGGLTE QGALATGALH KQVMPFVMRR TKDQVLKDLP
PKIIQDVYVD LTAAQRKMYD SFESSDAKSA AVSAVEGGGN AEGAAAHVFQ TLQYLRKLCS
HPKLVSDTTS KKFDPDMRSP KFDALKQILI DCGIGVDVEE EKASGEDAKP NPAAGAGHRV
LVFSQLKSLL DLVETELFTT QMRDVSWLRL DGSVAPSQRF DVVRKFNADP SIDVLLLTTH
VGGLGLNLTS ADTVVFLEHD WNPQKDLQAM DRAHRLGQRK TVNVYRILTR GTLEEKIMSL
QRFKLDVANA VVNADNASMS AMDTGQMLEL FTAEKGAKLG KDGEPVAKGA AAAAVGAASG
GLANIVNGLE EMWDEAQYAE EFDVDDFVSK LKQK
//