ID A0A090VVC4_9FLAO Unreviewed; 915 AA.
AC A0A090VVC4;
DT 26-NOV-2014, integrated into UniProtKB/TrEMBL.
DT 26-NOV-2014, sequence version 1.
DT 24-JAN-2024, entry version 29.
DE RecName: Full=alpha-L-rhamnosidase {ECO:0000256|ARBA:ARBA00012652};
DE EC=3.2.1.40 {ECO:0000256|ARBA:ARBA00012652};
GN ORFNames=JCM19301_1826 {ECO:0000313|EMBL:GAL67214.1}, JCM19538_3265
GN {ECO:0000313|EMBL:GAL89788.1};
OS Jejuia pallidilutea.
OC Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales;
OC Flavobacteriaceae; Jejuia.
OX NCBI_TaxID=504487 {ECO:0000313|EMBL:GAL67214.1, ECO:0000313|Proteomes:UP000029641};
RN [1] {ECO:0000313|Proteomes:UP000029641, ECO:0000313|Proteomes:UP000030184}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JCM 19301 {ECO:0000313|EMBL:GAL67214.1,
RC ECO:0000313|Proteomes:UP000029641}, and JCM 19538
RC {ECO:0000313|EMBL:GAL89788.1, ECO:0000313|Proteomes:UP000030184};
RA Takatani N., Nakanishi M., Meirelles P., Mino S., Suda W., Oshima K.,
RA Hattori M., Ohkuma M., Hosokawa M., Miyashita K., Thompson F.L., Niwa A.,
RA Sawabe T., Sawabe T.;
RT "Draft Genome Sequence of Marine Flavobacterium Jejuia pallidilutea Strain
RT 11shimoA1 and Pigmentation Mutants.";
RL Genome Announc. 2:e01236-14(2014).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=Hydrolysis of terminal non-reducing alpha-L-rhamnose residues
CC in alpha-L-rhamnosides.; EC=3.2.1.40;
CC Evidence={ECO:0000256|ARBA:ARBA00001445};
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:GAL67214.1}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; BBNR01000008; GAL67214.1; -; Genomic_DNA.
DR EMBL; BBNY01000053; GAL89788.1; -; Genomic_DNA.
DR RefSeq; WP_052417912.1; NZ_BBNY01000053.1.
DR AlphaFoldDB; A0A090VVC4; -.
DR STRING; 504487.JCM19538_3265; -.
DR eggNOG; COG3408; Bacteria.
DR OrthoDB; 9815108at2; -.
DR Proteomes; UP000029641; Unassembled WGS sequence.
DR Proteomes; UP000030184; Unassembled WGS sequence.
DR GO; GO:0030596; F:alpha-L-rhamnosidase activity; IEA:UniProtKB-EC.
DR GO; GO:0005975; P:carbohydrate metabolic process; IEA:InterPro.
DR Gene3D; 1.50.10.10; -; 1.
DR Gene3D; 2.60.120.260; Galactose-binding domain-like; 2.
DR Gene3D; 2.60.40.10; Immunoglobulins; 1.
DR Gene3D; 2.60.420.10; Maltose phosphorylase, domain 3; 1.
DR InterPro; IPR008928; 6-hairpin_glycosidase_sf.
DR InterPro; IPR012341; 6hp_glycosidase-like_sf.
DR InterPro; IPR016007; Alpha_rhamnosid.
DR InterPro; IPR035396; Bac_rhamnosid6H.
DR InterPro; IPR035398; Bac_rhamnosid_C.
DR InterPro; IPR013737; Bac_rhamnosid_N.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR008902; Rhamnosid_concanavalin.
DR PANTHER; PTHR33307:SF9; ALPHA-L-RHAMNOSIDASE; 1.
DR PANTHER; PTHR33307; ALPHA-RHAMNOSIDASE (EUROFUNG); 1.
DR Pfam; PF05592; Bac_rhamnosid; 1.
DR Pfam; PF17389; Bac_rhamnosid6H; 1.
DR Pfam; PF17390; Bac_rhamnosid_C; 1.
DR Pfam; PF08531; Bac_rhamnosid_N; 1.
DR PIRSF; PIRSF010631; A-rhamnsds; 1.
DR SUPFAM; SSF48208; Six-hairpin glycosidases; 1.
PE 4: Predicted;
KW Glycosidase {ECO:0000313|EMBL:GAL67214.1};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801, ECO:0000313|EMBL:GAL67214.1}.
FT DOMAIN 205..377
FT /note="Bacterial alpha-L-rhamnosidase N-terminal"
FT /evidence="ECO:0000259|Pfam:PF08531"
FT DOMAIN 395..484
FT /note="Alpha-L-rhamnosidase concanavalin-like"
FT /evidence="ECO:0000259|Pfam:PF05592"
FT DOMAIN 490..830
FT /note="Alpha-L-rhamnosidase six-hairpin glycosidase"
FT /evidence="ECO:0000259|Pfam:PF17389"
FT DOMAIN 832..906
FT /note="Alpha-L-rhamnosidase C-terminal"
FT /evidence="ECO:0000259|Pfam:PF17390"
SQ SEQUENCE 915 AA; 105380 MW; C5C0687A6D2F5C87 CRC64;
MNKNVLIFLF LLASFSGLTQ IKPYDLKLEY RENPEGVDVK KPRFFWKLKS AEAGQYQKNY
QLIVATSKEN IEKGVGDVYN SKKVKSSQTT QILYKGKPLR PATQYYWKVK VWDKNNIPSW
SKIATFSTGL FQKEDWKNAQ WIAWKPQKQW EKEWWERKDI ESKALQFQLP SLFGSSMSMF
ERYHFHHQNP YDASPLLRKA FKVSKKVKHA KAYISGLGYY ELFINGKRIG TQVLDPGWTD
YRQTILYATH DITEQIQNGE NLAGVMLGRG FYGQLAYDHW GFYKKDGYVG QPKLLCLIKV
QYEDGTEENV ISDLSWKVTG GPIVYDGPHM GEIYDARKEI KNWNIASFDD TSWDTVNPAP
HPGGEVVAQM CQPIRVTKTF QPVNIKSKGS YGQWIDTGTN SAGWIRLRLK NLKKGQQVTI
YYGEHLDPTS SGQPGRLQQM AYIGKGAAEE FAECRFSYKG YRYVQVKGYK TKITKDDVEV
KFVHSDVPLV GNFESSDKTV DAVHDICRKS LIFNLHSIVT DCPNREKNGW LGDAVTGVEF
GMANYDLAAL MTKFTRDIFD TQTTEGALSP IAPANNYRKG KSTLWSSAGV HIPWYMYQYY
GDTRLFENYW ENMMRWVEYS WRNNNSKTKD GMFAEIYNDW VPPYDATYRG GGKPGGNEVI
ASMNFYLVLK RLTYMADKLG KNKDKKRLEN QLKSIHQGIQ KYAFNAEKVE YSGLKPFPEF
LPVVNILALD YGIVPEKYRA QLEKRVVENI VEEKDYHLWG GIFSIHSAFE YLPKNGYANI
MHKVVVNEEW PSFGWMIKEG ATTLPEGYKF TSSDMHHFMG AVDNFFYRHI VGINADESHP
GFQNIILKPN FIKSMEFAKA SYNSIHGEIK AEWKKIDENT YEYYGEVPPN CEAKVVLPSK
TETIKSGAFK YVVNL
//