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Database: UniProt
Entry: A0A090VVC4_9FLAO
LinkDB: A0A090VVC4_9FLAO
Original site: A0A090VVC4_9FLAO 
ID   A0A090VVC4_9FLAO        Unreviewed;       915 AA.
AC   A0A090VVC4;
DT   26-NOV-2014, integrated into UniProtKB/TrEMBL.
DT   26-NOV-2014, sequence version 1.
DT   24-JAN-2024, entry version 29.
DE   RecName: Full=alpha-L-rhamnosidase {ECO:0000256|ARBA:ARBA00012652};
DE            EC=3.2.1.40 {ECO:0000256|ARBA:ARBA00012652};
GN   ORFNames=JCM19301_1826 {ECO:0000313|EMBL:GAL67214.1}, JCM19538_3265
GN   {ECO:0000313|EMBL:GAL89788.1};
OS   Jejuia pallidilutea.
OC   Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales;
OC   Flavobacteriaceae; Jejuia.
OX   NCBI_TaxID=504487 {ECO:0000313|EMBL:GAL67214.1, ECO:0000313|Proteomes:UP000029641};
RN   [1] {ECO:0000313|Proteomes:UP000029641, ECO:0000313|Proteomes:UP000030184}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=JCM 19301 {ECO:0000313|EMBL:GAL67214.1,
RC   ECO:0000313|Proteomes:UP000029641}, and JCM 19538
RC   {ECO:0000313|EMBL:GAL89788.1, ECO:0000313|Proteomes:UP000030184};
RA   Takatani N., Nakanishi M., Meirelles P., Mino S., Suda W., Oshima K.,
RA   Hattori M., Ohkuma M., Hosokawa M., Miyashita K., Thompson F.L., Niwa A.,
RA   Sawabe T., Sawabe T.;
RT   "Draft Genome Sequence of Marine Flavobacterium Jejuia pallidilutea Strain
RT   11shimoA1 and Pigmentation Mutants.";
RL   Genome Announc. 2:e01236-14(2014).
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=Hydrolysis of terminal non-reducing alpha-L-rhamnose residues
CC         in alpha-L-rhamnosides.; EC=3.2.1.40;
CC         Evidence={ECO:0000256|ARBA:ARBA00001445};
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:GAL67214.1}.
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DR   EMBL; BBNR01000008; GAL67214.1; -; Genomic_DNA.
DR   EMBL; BBNY01000053; GAL89788.1; -; Genomic_DNA.
DR   RefSeq; WP_052417912.1; NZ_BBNY01000053.1.
DR   AlphaFoldDB; A0A090VVC4; -.
DR   STRING; 504487.JCM19538_3265; -.
DR   eggNOG; COG3408; Bacteria.
DR   OrthoDB; 9815108at2; -.
DR   Proteomes; UP000029641; Unassembled WGS sequence.
DR   Proteomes; UP000030184; Unassembled WGS sequence.
DR   GO; GO:0030596; F:alpha-L-rhamnosidase activity; IEA:UniProtKB-EC.
DR   GO; GO:0005975; P:carbohydrate metabolic process; IEA:InterPro.
DR   Gene3D; 1.50.10.10; -; 1.
DR   Gene3D; 2.60.120.260; Galactose-binding domain-like; 2.
DR   Gene3D; 2.60.40.10; Immunoglobulins; 1.
DR   Gene3D; 2.60.420.10; Maltose phosphorylase, domain 3; 1.
DR   InterPro; IPR008928; 6-hairpin_glycosidase_sf.
DR   InterPro; IPR012341; 6hp_glycosidase-like_sf.
DR   InterPro; IPR016007; Alpha_rhamnosid.
DR   InterPro; IPR035396; Bac_rhamnosid6H.
DR   InterPro; IPR035398; Bac_rhamnosid_C.
DR   InterPro; IPR013737; Bac_rhamnosid_N.
DR   InterPro; IPR013783; Ig-like_fold.
DR   InterPro; IPR008902; Rhamnosid_concanavalin.
DR   PANTHER; PTHR33307:SF9; ALPHA-L-RHAMNOSIDASE; 1.
DR   PANTHER; PTHR33307; ALPHA-RHAMNOSIDASE (EUROFUNG); 1.
DR   Pfam; PF05592; Bac_rhamnosid; 1.
DR   Pfam; PF17389; Bac_rhamnosid6H; 1.
DR   Pfam; PF17390; Bac_rhamnosid_C; 1.
DR   Pfam; PF08531; Bac_rhamnosid_N; 1.
DR   PIRSF; PIRSF010631; A-rhamnsds; 1.
DR   SUPFAM; SSF48208; Six-hairpin glycosidases; 1.
PE   4: Predicted;
KW   Glycosidase {ECO:0000313|EMBL:GAL67214.1};
KW   Hydrolase {ECO:0000256|ARBA:ARBA00022801, ECO:0000313|EMBL:GAL67214.1}.
FT   DOMAIN          205..377
FT                   /note="Bacterial alpha-L-rhamnosidase N-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF08531"
FT   DOMAIN          395..484
FT                   /note="Alpha-L-rhamnosidase concanavalin-like"
FT                   /evidence="ECO:0000259|Pfam:PF05592"
FT   DOMAIN          490..830
FT                   /note="Alpha-L-rhamnosidase six-hairpin glycosidase"
FT                   /evidence="ECO:0000259|Pfam:PF17389"
FT   DOMAIN          832..906
FT                   /note="Alpha-L-rhamnosidase C-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF17390"
SQ   SEQUENCE   915 AA;  105380 MW;  C5C0687A6D2F5C87 CRC64;
     MNKNVLIFLF LLASFSGLTQ IKPYDLKLEY RENPEGVDVK KPRFFWKLKS AEAGQYQKNY
     QLIVATSKEN IEKGVGDVYN SKKVKSSQTT QILYKGKPLR PATQYYWKVK VWDKNNIPSW
     SKIATFSTGL FQKEDWKNAQ WIAWKPQKQW EKEWWERKDI ESKALQFQLP SLFGSSMSMF
     ERYHFHHQNP YDASPLLRKA FKVSKKVKHA KAYISGLGYY ELFINGKRIG TQVLDPGWTD
     YRQTILYATH DITEQIQNGE NLAGVMLGRG FYGQLAYDHW GFYKKDGYVG QPKLLCLIKV
     QYEDGTEENV ISDLSWKVTG GPIVYDGPHM GEIYDARKEI KNWNIASFDD TSWDTVNPAP
     HPGGEVVAQM CQPIRVTKTF QPVNIKSKGS YGQWIDTGTN SAGWIRLRLK NLKKGQQVTI
     YYGEHLDPTS SGQPGRLQQM AYIGKGAAEE FAECRFSYKG YRYVQVKGYK TKITKDDVEV
     KFVHSDVPLV GNFESSDKTV DAVHDICRKS LIFNLHSIVT DCPNREKNGW LGDAVTGVEF
     GMANYDLAAL MTKFTRDIFD TQTTEGALSP IAPANNYRKG KSTLWSSAGV HIPWYMYQYY
     GDTRLFENYW ENMMRWVEYS WRNNNSKTKD GMFAEIYNDW VPPYDATYRG GGKPGGNEVI
     ASMNFYLVLK RLTYMADKLG KNKDKKRLEN QLKSIHQGIQ KYAFNAEKVE YSGLKPFPEF
     LPVVNILALD YGIVPEKYRA QLEKRVVENI VEEKDYHLWG GIFSIHSAFE YLPKNGYANI
     MHKVVVNEEW PSFGWMIKEG ATTLPEGYKF TSSDMHHFMG AVDNFFYRHI VGINADESHP
     GFQNIILKPN FIKSMEFAKA SYNSIHGEIK AEWKKIDENT YEYYGEVPPN CEAKVVLPSK
     TETIKSGAFK YVVNL
//
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