ID A0A091EPT3_CORBR Unreviewed; 910 AA.
AC A0A091EPT3;
DT 26-NOV-2014, integrated into UniProtKB/TrEMBL.
DT 26-NOV-2014, sequence version 1.
DT 24-JAN-2024, entry version 30.
DE SubName: Full=Integrin alpha-4 {ECO:0000313|EMBL:KFO59918.1};
DE Flags: Fragment;
GN ORFNames=N302_06703 {ECO:0000313|EMBL:KFO59918.1};
OS Corvus brachyrhynchos (American crow).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Passeriformes; Corvoidea; Corvidae;
OC Corvus.
OX NCBI_TaxID=85066 {ECO:0000313|EMBL:KFO59918.1, ECO:0000313|Proteomes:UP000052976};
RN [1] {ECO:0000313|EMBL:KFO59918.1, ECO:0000313|Proteomes:UP000052976}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=BGI_N302 {ECO:0000313|EMBL:KFO59918.1};
RA Zhang G., Li C.;
RT "Genome evolution of avian class.";
RL Submitted (APR-2014) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004479,
CC ECO:0000256|RuleBase:RU003762}; Single-pass type I membrane protein
CC {ECO:0000256|ARBA:ARBA00004479, ECO:0000256|RuleBase:RU003762}.
CC -!- SIMILARITY: Belongs to the integrin alpha chain family.
CC {ECO:0000256|ARBA:ARBA00008054, ECO:0000256|RuleBase:RU003762}.
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DR EMBL; KK718916; KFO59918.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A091EPT3; -.
DR STRING; 85066.A0A091EPT3; -.
DR Proteomes; UP000052976; Unassembled WGS sequence.
DR GO; GO:0008305; C:integrin complex; IEA:InterPro.
DR GO; GO:0007155; P:cell adhesion; IEA:UniProtKB-KW.
DR GO; GO:0007229; P:integrin-mediated signaling pathway; IEA:UniProtKB-KW.
DR Gene3D; 1.20.5.930; Bicelle-embedded integrin alpha(iib) transmembrane segment; 1.
DR Gene3D; 2.130.10.130; Integrin alpha, N-terminal; 1.
DR Gene3D; 2.60.40.1460; Integrin domains. Chain A, domain 2; 1.
DR Gene3D; 2.60.40.1510; ntegrin, alpha v. Chain A, domain 3; 1.
DR Gene3D; 2.60.40.1530; ntegrin, alpha v. Chain A, domain 4; 1.
DR InterPro; IPR013517; FG-GAP.
DR InterPro; IPR013519; Int_alpha_beta-p.
DR InterPro; IPR000413; Integrin_alpha.
DR InterPro; IPR018184; Integrin_alpha_C_CS.
DR InterPro; IPR013649; Integrin_alpha_Ig-like_1.
DR InterPro; IPR048285; Integrin_alpha_Ig-like_2.
DR InterPro; IPR048286; Integrin_alpha_Ig-like_3.
DR InterPro; IPR028994; Integrin_alpha_N.
DR InterPro; IPR032695; Integrin_dom_sf.
DR PANTHER; PTHR23220; INTEGRIN ALPHA; 1.
DR PANTHER; PTHR23220:SF78; INTEGRIN ALPHA-4; 1.
DR Pfam; PF01839; FG-GAP; 2.
DR Pfam; PF08441; Integrin_A_Ig_1; 1.
DR Pfam; PF20805; Integrin_A_Ig_2; 1.
DR Pfam; PF20806; Integrin_A_Ig_3; 1.
DR PRINTS; PR01185; INTEGRINA.
DR SMART; SM00191; Int_alpha; 4.
DR SUPFAM; SSF69318; Integrin alpha N-terminal domain; 1.
DR SUPFAM; SSF69179; Integrin domains; 3.
DR PROSITE; PS51470; FG_GAP; 4.
DR PROSITE; PS00242; INTEGRIN_ALPHA; 1.
PE 3: Inferred from homology;
KW Cell adhesion {ECO:0000256|ARBA:ARBA00022889,
KW ECO:0000256|RuleBase:RU003762};
KW Glycoprotein {ECO:0000256|ARBA:ARBA00023180};
KW Integrin {ECO:0000256|ARBA:ARBA00023037, ECO:0000256|RuleBase:RU003762};
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|RuleBase:RU003762};
KW Receptor {ECO:0000256|ARBA:ARBA00023170, ECO:0000256|RuleBase:RU003762};
KW Reference proteome {ECO:0000313|Proteomes:UP000052976};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Signal {ECO:0000256|ARBA:ARBA00022729};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692,
KW ECO:0000256|RuleBase:RU003762};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW ECO:0000256|RuleBase:RU003762}.
FT TRANSMEM 857..879
FT /note="Helical"
FT /evidence="ECO:0000256|RuleBase:RU003762"
FT REPEAT 68..119
FT /note="FG-GAP"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00803"
FT REPEAT 173..232
FT /note="FG-GAP"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00803"
FT REPEAT 236..293
FT /note="FG-GAP"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00803"
FT REPEAT 297..359
FT /note="FG-GAP"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00803"
FT DOMAIN 344..500
FT /note="Integrin alpha first immunoglubulin-like"
FT /evidence="ECO:0000259|Pfam:PF08441"
FT DOMAIN 503..647
FT /note="Integrin alpha second immunoglobulin-like"
FT /evidence="ECO:0000259|Pfam:PF20805"
FT DOMAIN 659..827
FT /note="Integrin alpha third immunoglobulin-like"
FT /evidence="ECO:0000259|Pfam:PF20806"
FT REGION 891..910
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:KFO59918.1"
FT NON_TER 910
FT /evidence="ECO:0000313|EMBL:KFO59918.1"
SQ SEQUENCE 910 AA; 101559 MW; 992AD52A8A8D6347 CRC64;
LGNPSGERCG KTCSRQPKES GSIVACGHRW KNVFYVKNEH KLPHGICFAI PSDFRTELSR
RICPCYIDHA RKFGENHGSC QAGMSSFYIE DLIIMGAPGS FYWTGSVFVY NTTANTIHAY
TDSNNQVKFG SYLGYSVGAG HFLTPSSTEV VGGAPQQEQT GKAYIFSIEK QLNILFELRG
KKLGSYFGAS VCAVDLNSDG FSDLLVGAPM QSTIREEGRV YVYINSGSGA KMVELNIELS
GSDSYAARFG ESIANLGDID NDGFEDVAIG APQEDDLKGA VYIYNGRKDG ITPSFSQRIQ
GQEVSNSLSM FGQSISSGID VDNNGYQDVA VGAFFSDSAV VLRTKPVIIV EASLKHSNSI
NRTNLDCMEN EQPATCMNLK ICFTYSGREV PGYIVLLYNL SVDVNRKEDT QARFYFSSNG
TYDTISGKVK IYSSITACKD HPAFMRKDVR DILTPVHVEA SYHLGHHILQ KRDAQEFPPL
QPVLQRRKEK DVIKSKFIFA RFCSQENCSA DLRVSGKVVF PKPHDKKTYL GVGSVKTLLL
NISLLNVGDD AYETVLHIQI PKGLYYIRVL ELEEKQIHCA VLDKEINAVT LECSVGYLYV
DHDSKLDYSF LLDASSLTRA EEDLNIIINA TCKNEDGNML LDNMLTLPIP LKYEIELNTH
GFVSPTSFLY GAEGKDSPVT CMKENINFTF HVISAGPSMS PNTSLEIMIP NAFPPRDSKL
FNPLDIKTTA GHCSYNKYPR NCNTSENNEN ILKDVITFFS KPTKRHMYCM KNDSLCLQIH
CKLGNMESGK EATVQLHLEA TPLLLEMDDA SVLKFEVRAR AWPEKNAKVI ELHKDKQAAY
VYLEGVHHQK PKYHVTLLII TLGLIVGVTL FLVLSFILWK IGFFKRKYKP VPQDTNRRDS
WSFKSGNKND
//