ID A0A091EUX8_CORBR Unreviewed; 409 AA.
AC A0A091EUX8;
DT 26-NOV-2014, integrated into UniProtKB/TrEMBL.
DT 26-NOV-2014, sequence version 1.
DT 27-MAR-2024, entry version 35.
DE SubName: Full=Regulator of nonsense transcripts 3A {ECO:0000313|EMBL:KFO60811.1};
DE Flags: Fragment;
GN ORFNames=N302_15288 {ECO:0000313|EMBL:KFO60811.1};
OS Corvus brachyrhynchos (American crow).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Passeriformes; Corvoidea; Corvidae;
OC Corvus.
OX NCBI_TaxID=85066 {ECO:0000313|EMBL:KFO60811.1, ECO:0000313|Proteomes:UP000052976};
RN [1] {ECO:0000313|EMBL:KFO60811.1, ECO:0000313|Proteomes:UP000052976}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=BGI_N302 {ECO:0000313|EMBL:KFO60811.1};
RA Zhang G., Li C.;
RT "Genome evolution of avian class.";
RL Submitted (APR-2014) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the RENT3 family.
CC {ECO:0000256|ARBA:ARBA00005991}.
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DR EMBL; KK718990; KFO60811.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A091EUX8; -.
DR STRING; 85066.A0A091EUX8; -.
DR Proteomes; UP000052976; Unassembled WGS sequence.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IEA:InterPro.
DR CDD; cd12727; RRM_like_Smg4_UPF3A; 1.
DR Gene3D; 3.30.70.330; -; 1.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR039722; Upf3.
DR InterPro; IPR005120; UPF3_dom.
DR PANTHER; PTHR13112:SF2; REGULATOR OF NONSENSE TRANSCRIPTS 3A; 1.
DR PANTHER; PTHR13112; UPF3 REGULATOR OF NONSENSE TRANSCRIPTS-LIKE PROTEIN; 1.
DR Pfam; PF03467; Smg4_UPF3; 1.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000052976}.
FT DOMAIN 2..157
FT /note="UPF3"
FT /evidence="ECO:0000259|Pfam:PF03467"
FT REGION 182..203
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 217..309
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 353..393
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 217..247
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 259..309
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 353..368
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:KFO60811.1"
FT NON_TER 409
FT /evidence="ECO:0000313|EMBL:KFO60811.1"
SQ SEQUENCE 409 AA; 49084 MW; 2A6151E110F6B0A4 CRC64;
QVVIRRLPPC LTKEQLEEQL HPLPAHDYFE FCTADPSLYP HLYSRAYINF RNPEDILLFR
DRFDGYVFID NKGLEYPAVV EFAPFQKISK KKLKKKDAKA GSIEDDPEYR KFLESYCADE
EKICANPEIL LGEIEAKTRE LIARRTTPLL EYIKNRKLEK QRIREEKREE RRRRELEKKR
LREEEKRKRR EEERRKRKEV EKQKKISEKE IRIKLLKKPE KGDELASEKH KDKGEEADIE
ENKWDKSPGS GSIKSKSLES SLKELKEKSQ NDSDKEQRDL ERRFREKEPE RQRYRLDDGR
KHRTHYEFDK FMRRNEEELK WGKGYNQDRG KKGNYNYSFT VEAVDKLGKE DKCDDMASKK
ERIRNKDRPA MQLYQPGARI RTHMGPTSKT YDCSGKSFED ALDKKYEAD
//
