ID   A0A091UD03_PHALP        Unreviewed;       210 AA.
AC   A0A091UD03;
DT   26-NOV-2014, integrated into UniProtKB/TrEMBL.
DT   26-NOV-2014, sequence version 1.
DT   24-JAN-2024, entry version 24.
DE   SubName: Full=HLA class II histocompatibility antigen gamma chain {ECO:0000313|EMBL:KFQ71908.1};
DE   Flags: Fragment;
GN   ORFNames=N335_05938 {ECO:0000313|EMBL:KFQ71908.1};
OS   Phaethon lepturus (White-tailed tropicbird).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC   Coelurosauria; Aves; Neognathae; Eurypygimorphae; Phaethontiformes;
OC   Phaethontidae; Phaethon.
OX   NCBI_TaxID=97097 {ECO:0000313|EMBL:KFQ71908.1, ECO:0000313|Proteomes:UP000053638};
RN   [1] {ECO:0000313|EMBL:KFQ71908.1, ECO:0000313|Proteomes:UP000053638}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=BGI_N335 {ECO:0000313|EMBL:KFQ71908.1};
RA   Zhang G., Li C.;
RT   "Genome evolution of avian class.";
RL   Submitted (APR-2014) to the EMBL/GenBank/DDBJ databases.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; KK446859; KFQ71908.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A091UD03; -.
DR   PhylomeDB; A0A091UD03; -.
DR   Proteomes; UP000053638; Unassembled WGS sequence.
DR   GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR   GO; GO:0035718; F:macrophage migration inhibitory factor binding; IEA:InterPro.
DR   GO; GO:0042289; F:MHC class II protein binding; IEA:InterPro.
DR   GO; GO:0019882; P:antigen processing and presentation; IEA:InterPro.
DR   GO; GO:0006955; P:immune response; IEA:InterPro.
DR   GO; GO:0006886; P:intracellular protein transport; IEA:InterPro.
DR   GO; GO:0070206; P:protein trimerization; IEA:InterPro.
DR   Gene3D; 1.10.870.10; MHC class II-associated invariant chain, trimerisation domain; 1.
DR   InterPro; IPR043530; CD74_antigen.
DR   InterPro; IPR015386; MHC_II-assoc_invar/CLIP_MHC-bd.
DR   InterPro; IPR022339; MHC_II-assoc_invar_chain.
DR   InterPro; IPR011988; MHC_II-assoc_invariant_trimer.
DR   InterPro; IPR036613; MHCII_invariant_trimer_sf.
DR   PANTHER; PTHR14093; HLA CLASS II GAMMA CHAIN; 1.
DR   PANTHER; PTHR14093:SF17; HLA CLASS II HISTOCOMPATIBILITY ANTIGEN GAMMA CHAIN; 1.
DR   Pfam; PF09307; MHC2-interact; 1.
DR   Pfam; PF08831; MHCassoc_trimer; 1.
DR   PIRSF; PIRSF001992; CD74_antigen; 1.
DR   PRINTS; PR01990; CD74ANTIGEN.
DR   SUPFAM; SSF48305; Class II MHC-associated invariant chain ectoplasmic trimerization domain; 1.
PE   4: Predicted;
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000053638};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM        21..46
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   DOMAIN          18..94
FT                   /note="MHC class II-associated invariant chain/CLIP MHC II-
FT                   interacting"
FT                   /evidence="ECO:0000259|Pfam:PF09307"
FT   DOMAIN          109..176
FT                   /note="MHC class II-associated invariant chain
FT                   trimerisation"
FT                   /evidence="ECO:0000259|Pfam:PF08831"
FT   NON_TER         1
FT                   /evidence="ECO:0000313|EMBL:KFQ71908.1"
FT   NON_TER         210
FT                   /evidence="ECO:0000313|EMBL:KFQ71908.1"
SQ   SEQUENCE   210 AA;  23071 MW;  7EC731B075677DAC CRC64;
     SSRWPGLSSL SMSCRSALGR KAAFSTLSIL VALLIAGQAV TIYFVYQQSG QISKLTKTSQ
     NLQLEALQRK LPASAKPVKK ISVVNMPLAA RILPLAPAAG NMVSAPASNK TEDQVRHLLL
     QADPRKMFPV LKDNLMDNLK SLKNTMTDAD WKSFESWMHK WLLFEMAKNS KVEERKAIPA
     EKAPMSCPPS ADAAPTEPEE MIFSGVDMLK
//