ID A0A093FPR8_TYTAL Unreviewed; 272 AA.
AC A0A093FPR8;
DT 26-NOV-2014, integrated into UniProtKB/TrEMBL.
DT 26-NOV-2014, sequence version 1.
DT 24-JAN-2024, entry version 24.
DE RecName: Full=Ribosomal RNA-processing protein 42 {ECO:0000256|ARBA:ARBA00042523};
DE Flags: Fragment;
GN ORFNames=N341_05103 {ECO:0000313|EMBL:KFV56341.1};
OS Tyto alba (Barn owl).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Strigiformes; Tytonidae; Tyto.
OX NCBI_TaxID=56313 {ECO:0000313|EMBL:KFV56341.1, ECO:0000313|Proteomes:UP000054190};
RN [1] {ECO:0000313|EMBL:KFV56341.1, ECO:0000313|Proteomes:UP000054190}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=BGI_N341 {ECO:0000313|EMBL:KFV56341.1};
RA Zhang G., Li C.;
RT "Genome evolution of avian class.";
RL Submitted (APR-2014) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
CC -!- SIMILARITY: Belongs to the RNase PH family.
CC {ECO:0000256|ARBA:ARBA00006678}.
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DR EMBL; KK394238; KFV56341.1; -; Genomic_DNA.
DR RefSeq; XP_009969181.1; XM_009970879.1.
DR AlphaFoldDB; A0A093FPR8; -.
DR Proteomes; UP000054190; Unassembled WGS sequence.
DR CDD; cd11367; RNase_PH_RRP42; 1.
DR Gene3D; 3.30.230.70; GHMP Kinase, N-terminal domain; 1.
DR InterPro; IPR001247; ExoRNase_PH_dom1.
DR InterPro; IPR015847; ExoRNase_PH_dom2.
DR InterPro; IPR036345; ExoRNase_PH_dom2_sf.
DR InterPro; IPR027408; PNPase/RNase_PH_dom_sf.
DR InterPro; IPR020568; Ribosomal_Su5_D2-typ_SF.
DR PANTHER; PTHR11097:SF8; EXOSOME COMPLEX COMPONENT RRP42; 1.
DR PANTHER; PTHR11097; EXOSOME COMPLEX EXONUCLEASE RIBOSOMAL RNA PROCESSING PROTEIN; 1.
DR Pfam; PF01138; RNase_PH; 1.
DR Pfam; PF03725; RNase_PH_C; 1.
DR SUPFAM; SSF55666; Ribonuclease PH domain 2-like; 1.
DR SUPFAM; SSF54211; Ribosomal protein S5 domain 2-like; 1.
PE 3: Inferred from homology;
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW Exosome {ECO:0000256|ARBA:ARBA00022835};
KW Reference proteome {ECO:0000313|Proteomes:UP000054190}.
FT DOMAIN 13..147
FT /note="Exoribonuclease phosphorolytic"
FT /evidence="ECO:0000259|Pfam:PF01138"
FT DOMAIN 177..242
FT /note="Exoribonuclease phosphorolytic"
FT /evidence="ECO:0000259|Pfam:PF03725"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:KFV56341.1"
FT NON_TER 272
FT /evidence="ECO:0000313|EMBL:KFV56341.1"
SQ SEQUENCE 272 AA; 29683 MW; 46D8092246734BE1 CRC64;
EDLRVDGRGC EDYRCAEVET DVVSNTSGSA RVKLGHTDIL VGVKAEMGTP KLEKPDEGYL
EFCVDCSASA TPEFEGRGGE EFGTDIASTL YRVFSSESCV DLKSLCINPR EHCWVLYVDV
LLLECGGNLF DAISIAVKAA LFNTRIPKVR VLEDEEGSKE IELSDDPYDC IRLNVEDVPC
IVTLSKIGYR HVVDATLQEE ACSLASLLIS VTSKGALTSM KKVGKGSLDP ESIFEMMETG
KRIGKSLHIA LQKILDEEES LGTSRQKVGF LG
//