ID A0A093FRB6_GAVST Unreviewed; 360 AA.
AC A0A093FRB6;
DT 26-NOV-2014, integrated into UniProtKB/TrEMBL.
DT 26-NOV-2014, sequence version 1.
DT 27-MAR-2024, entry version 31.
DE SubName: Full=Transcription elongation factor A N-terminal and central domain-containing protein {ECO:0000313|EMBL:KFV60312.1};
GN ORFNames=N328_01716 {ECO:0000313|EMBL:KFV60312.1};
OS Gavia stellata (Red-throated diver) (Colymbus stellatus).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Gaviiformes; Gaviidae; Gavia.
OX NCBI_TaxID=37040 {ECO:0000313|EMBL:KFV60312.1, ECO:0000313|Proteomes:UP000054313};
RN [1] {ECO:0000313|EMBL:KFV60312.1, ECO:0000313|Proteomes:UP000054313}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=BGI_N328 {ECO:0000313|EMBL:KFV60312.1};
RA Zhang G., Li C.;
RT "Genome evolution of avian class.";
RL Submitted (APR-2014) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|PROSITE-ProRule:PRU00649}.
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DR EMBL; KK639314; KFV60312.1; -; Genomic_DNA.
DR RefSeq; XP_009818101.1; XM_009819799.1.
DR AlphaFoldDB; A0A093FRB6; -.
DR KEGG; gste:104263187; -.
DR CTD; 170082; -.
DR OrthoDB; 1383197at2759; -.
DR Proteomes; UP000054313; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003746; F:translation elongation factor activity; IEA:UniProtKB-KW.
DR GO; GO:0006351; P:DNA-templated transcription; IEA:InterPro.
DR Gene3D; 2.20.25.10; -; 1.
DR Gene3D; 1.20.930.10; Conserved domain common to transcription factors TFIIS, elongin A, CRSP70; 1.
DR Gene3D; 1.10.472.30; Transcription elongation factor S-II, central domain; 1.
DR InterPro; IPR035100; TF_IIS-typ.
DR InterPro; IPR035441; TFIIS/LEDGF_dom_sf.
DR InterPro; IPR003618; TFIIS_cen_dom.
DR InterPro; IPR036575; TFIIS_cen_dom_sf.
DR InterPro; IPR017923; TFIIS_N.
DR PANTHER; PTHR11477:SF7; TRANSCRIPTION ELONGATION FACTOR A N-TERMINAL AND CENTRAL DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR11477; TRANSCRIPTION FACTOR S-II ZINC FINGER DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF08711; Med26; 1.
DR Pfam; PF07500; TFIIS_M; 1.
DR PIRSF; PIRSF006704; TF_IIS; 1.
DR SMART; SM00510; TFS2M; 1.
DR SUPFAM; SSF47676; Conserved domain common to transcription factors TFIIS, elongin A, CRSP70; 1.
DR SUPFAM; SSF46942; Elongation factor TFIIS domain 2; 1.
DR SUPFAM; SSF57783; Zinc beta-ribbon; 1.
DR PROSITE; PS51321; TFIIS_CENTRAL; 1.
DR PROSITE; PS51319; TFIIS_N; 1.
PE 4: Predicted;
KW Elongation factor {ECO:0000313|EMBL:KFV60312.1};
KW Nucleus {ECO:0000256|PROSITE-ProRule:PRU00649};
KW Protein biosynthesis {ECO:0000313|EMBL:KFV60312.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000054313}.
FT DOMAIN 1..82
FT /note="TFIIS N-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51319"
FT DOMAIN 182..298
FT /note="TFIIS central"
FT /evidence="ECO:0000259|PROSITE:PS51321"
FT REGION 108..129
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 112..129
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 360 AA; 41318 MW; 97A61F4260E6F2F8 CRC64;
MSDQKNIVHR ARCIQKLLPE NNFQDIEDHL KELEDVDMTI EYLQRTEVAK AVYRVLKSCA
SAELKKKAKQ LLSRWKALYK NNCVQSMQVK TSVSVYVKEE IEHLSVVPRG QSLSEGPHQQ
EASDATSSEL LVPSQTVKNV VHNDAEGSMN QLSSFEEYHT DNEDSERLVN EASLRQDPMG
ALRCKSTDLL YKALTGSAKD EEETDKWLEL SKEIEEHIFA LHAKNDKKYK NCIRSKISNL
KNPKSCHLKH NLFSGKLSPK TFAEMTVMEM ASDELKQLRA LYTESSVQEH QLPQVINGTQ
TNKIKCRRCE KFDCTVTVIA RGTLFLPGWV RNTSPDEQML TYVICNECGE QWYHSRWICL
//
