GenomeNet

Database: UniProt
Entry: A0A093H6J1_GAVST
LinkDB: A0A093H6J1_GAVST
Original site: A0A093H6J1_GAVST 
ID   A0A093H6J1_GAVST        Unreviewed;       566 AA.
AC   A0A093H6J1;
DT   26-NOV-2014, integrated into UniProtKB/TrEMBL.
DT   26-NOV-2014, sequence version 1.
DT   24-JAN-2024, entry version 40.
DE   SubName: Full=Zinc finger MYND domain-containing protein 11 {ECO:0000313|EMBL:KFV50303.1};
DE   Flags: Fragment;
GN   ORFNames=N328_00699 {ECO:0000313|EMBL:KFV50303.1};
OS   Gavia stellata (Red-throated diver) (Colymbus stellatus).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC   Coelurosauria; Aves; Neognathae; Gaviiformes; Gaviidae; Gavia.
OX   NCBI_TaxID=37040 {ECO:0000313|EMBL:KFV50303.1, ECO:0000313|Proteomes:UP000054313};
RN   [1] {ECO:0000313|EMBL:KFV50303.1, ECO:0000313|Proteomes:UP000054313}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=BGI_N328 {ECO:0000313|EMBL:KFV50303.1};
RA   Zhang G., Li C.;
RT   "Genome evolution of avian class.";
RL   Submitted (APR-2014) to the EMBL/GenBank/DDBJ databases.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; KK619214; KFV50303.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A093H6J1; -.
DR   Proteomes; UP000054313; Unassembled WGS sequence.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0003714; F:transcription corepressor activity; IEA:InterPro.
DR   GO; GO:0006325; P:chromatin organization; IEA:UniProtKB-KW.
DR   GO; GO:0034243; P:regulation of transcription elongation by RNA polymerase II; IEA:InterPro.
DR   CDD; cd05492; Bromo_ZMYND11; 1.
DR   CDD; cd15537; PHD_BS69; 1.
DR   CDD; cd20159; PWWP_BS69; 1.
DR   Gene3D; 2.30.30.140; -; 1.
DR   Gene3D; 6.10.140.2220; -; 1.
DR   Gene3D; 1.20.920.10; Bromodomain-like; 1.
DR   Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR   InterPro; IPR001487; Bromodomain.
DR   InterPro; IPR036427; Bromodomain-like_sf.
DR   InterPro; IPR047268; PWWP_BS69.
DR   InterPro; IPR000313; PWWP_dom.
DR   InterPro; IPR019786; Zinc_finger_PHD-type_CS.
DR   InterPro; IPR047269; ZMY11.
DR   InterPro; IPR011011; Znf_FYVE_PHD.
DR   InterPro; IPR002893; Znf_MYND.
DR   InterPro; IPR001965; Znf_PHD.
DR   InterPro; IPR019787; Znf_PHD-finger.
DR   InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR   PANTHER; PTHR46379; ZINC FINGER MYND DOMAIN-CONTAINING; 1.
DR   PANTHER; PTHR46379:SF1; ZINC FINGER MYND DOMAIN-CONTAINING PROTEIN 11; 1.
DR   Pfam; PF00439; Bromodomain; 1.
DR   Pfam; PF00855; PWWP; 1.
DR   SMART; SM00297; BROMO; 1.
DR   SMART; SM00249; PHD; 1.
DR   SMART; SM00293; PWWP; 1.
DR   SUPFAM; SSF47370; Bromodomain; 1.
DR   SUPFAM; SSF57903; FYVE/PHD zinc finger; 1.
DR   SUPFAM; SSF144232; HIT/MYND zinc finger-like; 1.
DR   SUPFAM; SSF63748; Tudor/PWWP/MBT; 1.
DR   PROSITE; PS50014; BROMODOMAIN_2; 1.
DR   PROSITE; PS50812; PWWP; 1.
DR   PROSITE; PS01360; ZF_MYND_1; 1.
DR   PROSITE; PS50865; ZF_MYND_2; 1.
DR   PROSITE; PS01359; ZF_PHD_1; 1.
DR   PROSITE; PS50016; ZF_PHD_2; 1.
PE   4: Predicted;
KW   Bromodomain {ECO:0000256|PROSITE-ProRule:PRU00035};
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW   Reference proteome {ECO:0000313|Proteomes:UP000054313};
KW   Zinc {ECO:0000256|ARBA:ARBA00022833};
KW   Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW   ProRule:PRU00134}.
FT   DOMAIN          64..112
FT                   /note="PHD-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50016"
FT   DOMAIN          150..202
FT                   /note="Bromo"
FT                   /evidence="ECO:0000259|PROSITE:PS50014"
FT   DOMAIN          244..295
FT                   /note="PWWP"
FT                   /evidence="ECO:0000259|PROSITE:PS50812"
FT   DOMAIN          527..562
FT                   /note="MYND-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50865"
FT   REGION          330..423
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COILED          451..520
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COMPBIAS        354..379
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        381..423
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   NON_TER         1
FT                   /evidence="ECO:0000313|EMBL:KFV50303.1"
FT   NON_TER         566
FT                   /evidence="ECO:0000313|EMBL:KFV50303.1"
SQ   SEQUENCE   566 AA;  66695 MW;  FF823CB6590BB1DD CRC64;
     LCRYMSRVHG MHPKETTRQL SLAVKDGLIV ETLTVGCKGS KAGIEQEGYW LPGDEIDWET
     ENHDWYCFEC HLPGEVLICD LCFRVYHSKC LSDEFRLRDS SSHWQCPVCR SIKKKNTSKQ
     EMSTYLRFIV SRMKERAIDL NKKGKDNKHP MYRRLVHSAV DVPTIQEKVN EGKYRSYEEF
     KADAQLLLHN TVIFYGVDSE QADIARMLYK DTCHELDELQ LCKNCFYLSN ARPDNWFCYP
     CIPNHELVWA KMKGFGFWPA KVMQKEDNQV DVRFFGHHHQ RAWIPSENIQ DITVNIHRLH
     VKRSMGWKKA CDELELHQRF LREGRFWKSK NEDKGEEEAE SSISSTSNDQ LKVTQEPRAK
     KGRRNQSMEL KKEEPEPETE AVSSSQEIPT MPQPIEKVSV STQTKKLSAS SPKMLHRSTQ
     TSNDGVCQNM CHDKYTKIFN DFKDRMKADH KRETERVVRE AVEKLRTEME EEKRQAVNKA
     VANAQGEMDR KCKQVKEKCK EEFLEEIKKL AGQHKQLISQ TKKKQWCYNC EEEAMYHCCW
     NTSYCSIKCQ QEHWHAEHKR TCRRKR
//
DBGET integrated database retrieval system