ID A0A093IB08_STRCA Unreviewed; 872 AA.
AC A0A093IB08;
DT 26-NOV-2014, integrated into UniProtKB/TrEMBL.
DT 26-NOV-2014, sequence version 1.
DT 27-MAR-2024, entry version 28.
DE RecName: Full=DNA polymerase kappa {ECO:0000256|ARBA:ARBA00016178};
GN ORFNames=N308_15579 {ECO:0000313|EMBL:KFV88307.1};
OS Struthio camelus australis.
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Palaeognathae; Struthioniformes; Struthionidae;
OC Struthio.
OX NCBI_TaxID=441894 {ECO:0000313|EMBL:KFV88307.1, ECO:0000313|Proteomes:UP000053584};
RN [1] {ECO:0000313|EMBL:KFV88307.1, ECO:0000313|Proteomes:UP000053584}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=BGI_N308 {ECO:0000313|EMBL:KFV88307.1};
RA Zhang G., Li C.;
RT "Genome evolution of avian class.";
RL Submitted (APR-2014) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; KL206993; KFV88307.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A093IB08; -.
DR STRING; 441894.ENSSCUP00000025988; -.
DR Proteomes; UP000053584; Unassembled WGS sequence.
DR GO; GO:0003684; F:damaged DNA binding; IEA:InterPro.
DR GO; GO:0003887; F:DNA-directed DNA polymerase activity; IEA:InterPro.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
DR CDD; cd03586; PolY_Pol_IV_kappa; 1.
DR Gene3D; 1.10.150.810; -; 1.
DR Gene3D; 3.30.70.270; -; 1.
DR Gene3D; 3.40.1170.60; -; 1.
DR Gene3D; 1.10.150.20; 5' to 3' exonuclease, C-terminal subdomain; 1.
DR Gene3D; 3.30.160.60; Classic Zinc Finger; 2.
DR Gene3D; 3.30.1490.100; DNA polymerase, Y-family, little finger domain; 1.
DR HAMAP; MF_01113; DNApol_IV; 1.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR036775; DNA_pol_Y-fam_lit_finger_sf.
DR InterPro; IPR017961; DNA_pol_Y-fam_little_finger.
DR InterPro; IPR022880; DNApol_IV.
DR InterPro; IPR024728; PolY_HhH_motif.
DR InterPro; IPR006642; Rad18_UBZ4.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR InterPro; IPR001126; UmuC.
DR PANTHER; PTHR11076:SF33; DNA POLYMERASE KAPPA; 1.
DR PANTHER; PTHR11076; DNA REPAIR POLYMERASE UMUC / TRANSFERASE FAMILY MEMBER; 1.
DR Pfam; PF00817; IMS; 1.
DR Pfam; PF11799; IMS_C; 1.
DR Pfam; PF11798; IMS_HHH; 1.
DR SMART; SM00734; ZnF_Rad18; 2.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR SUPFAM; SSF100879; Lesion bypass DNA polymerase (Y-family), little finger domain; 1.
DR PROSITE; PS50173; UMUC; 1.
DR PROSITE; PS51908; ZF_UBZ4; 2.
PE 3: Inferred from homology;
KW DNA damage {ECO:0000256|ARBA:ARBA00022763, ECO:0000256|PROSITE-
KW ProRule:PRU01256};
KW DNA repair {ECO:0000256|ARBA:ARBA00023204, ECO:0000256|PROSITE-
KW ProRule:PRU01256}; DNA synthesis {ECO:0000256|ARBA:ARBA00022634};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000053584};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU01256}.
FT DOMAIN 103..352
FT /note="UmuC"
FT /evidence="ECO:0000259|PROSITE:PS50173"
FT DOMAIN 613..643
FT /note="UBZ4-type"
FT /evidence="ECO:0000259|PROSITE:PS51908"
FT DOMAIN 769..799
FT /note="UBZ4-type"
FT /evidence="ECO:0000259|PROSITE:PS51908"
FT REGION 810..872
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 872 AA; 98752 MW; 0F54ED7E9682F6D2 CRC64;
MDDIKVDNTS CNDGVLLRMG LNDNKAGMQG LDKEKINKII MEATKGSRFY ENELKKDKQV
NQRIEKMMQL KEKITNQQLL KAQLQVDKLV MELEQSRDLS CTIVHIDMDA FYAAVEMRDN
PELKEKPIAV GSMSMLSTSN YHARRFGVRA AMPGFIAKKL CPHLTIVPLN FEKYGKVSKE
VREILAEYDP NFMPMGLDEA YLNITEYLEE RLNWPEDKRR YFFNTENTTE NDKQDMNMST
KFNLNEDTFS SSPLLFEDNA SLTDDHPEQR NLPAVNSIVF GTSAEEVVKE IRFRIEQKTR
LTASAGIAPN TMLAKMCSDH NKPNGQYRIT PERQAVLDFV KDLPIRKVPG IGKVTEKMLK
ALGIVTCSEL YQQRALLSLL FSEASWHNFL EISLGLGSTH LEKDGERKSM STERTFSEIN
TAEDQYSLCR ELCRDLAQEL QKEGLKGKTV TLKLKNVNFE VKTRASTVPS SVSTEEEIFA
VAKDLLGTEI DTVSPHPLRI RLMGVRVSGF LSEEEKKYQQ RSIKSFLKSG KEINFLRLEP
GKSNQELCTK NSEAAPRGSF FDKKRAARQQ NREDLFLNED VDKRVFHDRK SSANFMEETS
KVTAMQNSAV HKIFTCPVCF EEQSSSSLEE LNRHIDECLA GSLVKDTVEI LKNESSKENT
FNSIPCCKNE NVEVCQKSNM DQLAGTCQSA STDVNSASSS AEKFTQMVVA KPHKERQPSQ
LGDIARNVCI KQCLFPKRIS LENADHLEKI ENTEETSSSC FFEAKEDNVL VCPVCNLEQK
TTSLMLFNRH VDICLNKGII QELTEKNNCP TKTYDTENSN RVGSLSRGQQ CTNQSQGTKR
KLDESSGLAT SQSVSKKAKS SNSKHTIEMF FK
//
