ID A0A093YJW9_9PEZI Unreviewed; 2346 AA.
AC A0A093YJW9;
DT 26-NOV-2014, integrated into UniProtKB/TrEMBL.
DT 26-NOV-2014, sequence version 1.
DT 27-MAR-2024, entry version 33.
DE RecName: Full=Zinc-finger domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=O988_00194 {ECO:0000313|EMBL:KFY05189.1};
OS Pseudogymnoascus sp. VKM F-3808.
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes;
OC Leotiomycetes incertae sedis; Pseudeurotiaceae; Pseudogymnoascus.
OX NCBI_TaxID=1391699 {ECO:0000313|EMBL:KFY05189.1, ECO:0000313|Proteomes:UP000029329};
RN [1] {ECO:0000313|EMBL:KFY05189.1, ECO:0000313|Proteomes:UP000029329}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=VKM F-3808 {ECO:0000313|EMBL:KFY05189.1,
RC ECO:0000313|Proteomes:UP000029329};
RA Leushkin E.V., Logacheva M.D., Penin A.A., Sutormin R.A., Gerasimov E.S.,
RA Kochkina G.A., Ivanushkina N.E., Vasilenko O.V., Kondrashov A.S.,
RA Ozerskaya S.M.;
RT "Population genomics of a fungus Geomyces pannorum provides evidence of
RT horizontal gene transfer but not of sexual reproduction.";
RL Submitted (JUL-2014) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the NEMF family.
CC {ECO:0000256|ARBA:ARBA00008318}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KFY05189.1}.
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DR EMBL; JPJR01000030; KFY05189.1; -; Genomic_DNA.
DR STRING; 1391699.A0A093YJW9; -.
DR HOGENOM; CLU_229552_0_0_1; -.
DR Proteomes; UP000029329; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
DR GO; GO:0072344; P:rescue of stalled ribosome; IEA:UniProt.
DR Gene3D; 2.30.310.10; ibrinogen binding protein from staphylococcus aureus domain; 1.
DR InterPro; IPR021846; NFACT-C.
DR InterPro; IPR008532; NFACT_RNA-bd.
DR InterPro; IPR019607; Putative_zinc-finger_domain.
DR PANTHER; PTHR15239; NUCLEAR EXPORT MEDIATOR FACTOR NEMF; 1.
DR PANTHER; PTHR15239:SF6; RIBOSOME QUALITY CONTROL COMPLEX SUBUNIT NEMF; 1.
DR Pfam; PF11923; NFACT-C; 1.
DR Pfam; PF05670; NFACT-R_1; 1.
DR Pfam; PF05833; NFACT_N; 1.
DR Pfam; PF10650; zf-C3H1; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|ARBA:ARBA00023054};
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW Reference proteome {ECO:0000313|Proteomes:UP000029329}.
FT DOMAIN 1191..1212
FT /note="Putative zinc-finger"
FT /evidence="ECO:0000259|Pfam:PF10650"
FT DOMAIN 1823..1936
FT /note="NFACT RNA-binding"
FT /evidence="ECO:0000259|Pfam:PF05670"
FT DOMAIN 2211..2318
FT /note="NFACT protein C-terminal"
FT /evidence="ECO:0000259|Pfam:PF11923"
FT REGION 1..25
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 102..234
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 249..286
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 333..389
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 416..445
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 625..674
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 686..715
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 752..782
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 829..1148
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1723..1745
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1963..2185
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 2323..2346
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 104..120
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 220..234
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 422..445
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 695..715
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 881..941
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 960..983
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1000..1017
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1018..1032
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1040..1056
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1074..1130
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1999..2016
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 2018..2049
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 2076..2093
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 2154..2185
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 2346 AA; 256810 MW; EA495451CEAEC5AB CRC64;
MAGYPPPPSF GPAPGQRGQA VPFQYPTPQN AEYAYSRPSQ SSNMSAFGQN AAALAPGVEY
NARPPSFNPT ARNSGAPPLP IYGGLDPSAL YQRPMWAAQA NPPVISNPLE SSTTGVFSGQ
GPFVLQPELR PQGSADQSTT RPGLQAVEEG ELSEGEYEEE DTEVVSGPSQ GGAGDYNDYR
KDHGRPSHGS INQRQSSVEK KTPVPLVDSY GRSRDTHRQS SDSYSPPSSG PAASVLATRE
QDIQAFTLSK QGVESNSNRQ VENGKTGLDN RSGFTSTSVS RAKSVQDARR QAQNAVLNLI
PLKVRFQNFL DEGIDEDIIR SVFDDIGMSS SYSSTKQLSG EIGQGQQATG FTPQASGVPQ
THSKLNTNTT NTNSSSQNPG NSQQTIKNAV PIANKGEERK DRIARLLEEK SKKLLNLPQP
MSPANPILTD NSLPSKTTTS QSTTKIDKEK LLKQKMEALQ KSREERAQKF TTKEPAASTL
QSGMIGPGQP QSFQSQIIPP STSALSTSPR HDIRTYSASP QHLEPSTSMP SIPGLFLSGT
ANTLQPNIPQ STVQNTNLRK RPVAWDFDSN VPTNTTYKRP FGHSRNDQRL VIDVSEDESD
NESVDMEIDD QVTDISARDI QTTNTLRPGL RDLPPLSDFP PKKPFAAPAS AISTPPSLQG
PPRNSTRPED LKKKEFEIQE MRRKIAEAEQ RKKAKQVASG SQTPMNKTST PVQNISAKDA
SISSKIHTSI HIERLIDDAS RRIVEEQEKL ARTQALEEHS AEDLKQRETE QRRQRRARIA
ADLPAVDAEV QESQRRLAGL REEMENLELA VQKRLEEKRR LAEEMEKLGH EVDDQLEAQK
DQLMSLTDDI ATGREGDSQV LPEPPSAASV PVDPNPRTLA DQEDISMSDY LTDSESPASE
EPAATGSLAS KEPSLSPAVD GSSGNQRQLS GSPSAELPPP NLSVQSPAAI MAGLPKSDEE
DASPTNTNIT EPQALQPSFE ARDQLQTPPI DLDVDNTNPP SQEDTEEEVD MEESIADDEE
SMQSKDMEID EPYAPDADSI ADVQSQNASE AKSPGLESNP ASAADGDSDN YEPPEATPPS
STELIAANSP PFSPQSPEST QGAPGTDQEM SLAPSERSTE PANPVGAQLS HKSNDEDETE
KAPAHKSFFT PYESPLKRFK AYRFHPEFTK QVPGGYKSLT YSNNIDDSKE LCRFELAGGV
CNDVSCEFQH FRDIVLPDEL ILVSLGDSSG YKEEDRTRFI KGLKEVLQDL RISKIRDFQT
TDEAFAALNV FDSSSLEHDD PGFMHSVIAH ELSNSLVTLR LANVYDLSSK IFLLRFAKPD
DKKQMIIDSG FRCHLTSFSR ATAASPSVFV TKLRKFLKTR RVTAVSQIGT DRIIEFQFSE
GQYRLFLEFY AGGNIILTDK ELNILTLLRT VPPGEGQEEQ RIGLKYSLEN RQNYLGIPPL
TKDRLQAALR KAAEQSENAP AQKKQGKKGI DSLRRALAVS ITEFPPLLVD HAMRVTDFDP
TLKPADIANN DTLLDHLLRS LEEADRVVKE ITSSDVATGY IIAKKQERTD RAASGDEETE
KQALLYEDFH PFKPRQFEDD PDSTFVPFEG FNNTVDEFFS SIEGQRLESR LHEREVTAKK
KLQAAKDDQQ KRLGGLQEIQ TLNERKAGAI EANVQRVQEA TDAVNGLIAQ GMDWIEIGKL
IDIEQKRGNP VASIIKLPLK LHENTITLLL DEEIFGEDWD DEAYETGSDV SDSEDEAPPK
EAAKKAVDKR LSIDINLGAS PWSNAREYYG QRRSAAEKEK KTLESSTKAL KSTSHKIQQD
LKKGLKQEKA ILRPVRKHMW FEKFTWFISS DGYLVLGGRD AQQNEILYKR YLRKGDVYVH
ADLDGAASVF IRNHEARVDA PIPPSTLSQA GILAVASSSA WESKAGMPAW WANADQVSKS
APTGDYLKPG SFAVRGKKNF LPPAPLLLGF GVMFHVSDES KANHMKHRVH GGESASGANA
KASESAEHPT QPDSDDEDNQ RNASDEDDDE QSEETNDASA TESRQNPLQF TGGQPDPEVS
QSELDEDTTL TGLQDLAVDD KKAPPTGNVD SKGSKDLSPV EADDPKSEAG AESSDEESVA
APSLASTKQK GQAPLPRGKR NKLKKASQKY KHQDLEDKLA AQALTGATAG AKKAEAEAEA
KRAFEAEQKF NEQRRKAQHE RTQQEIAKHE EARKAMMEAG EDIVDEEADE AEKAVNLDAL
VGTALPGDDI LDVIPVCAPW TAMGKYKYKV KLQPGPMKKG KAVKEILSKW GVDSLVKAYV
DESSNDVEKM WPREVELVKG LKAEEIVNVI PVGKVAIMLG GGASGAARKG GGAGKGKGGR
GSKKQK
//
