ID A0A099P5E0_PICKU Unreviewed; 282 AA.
AC A0A099P5E0;
DT 07-JAN-2015, integrated into UniProtKB/TrEMBL.
DT 07-JAN-2015, sequence version 1.
DT 24-JAN-2024, entry version 33.
DE RecName: Full=Ribosomal RNA-processing protein 43 {ECO:0008006|Google:ProtNLM};
GN ORFNames=JL09_g1469 {ECO:0000313|EMBL:KGK39402.1};
OS Pichia kudriavzevii (Yeast) (Issatchenkia orientalis).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes;
OC Saccharomycetales; Pichiaceae; Pichia.
OX NCBI_TaxID=4909 {ECO:0000313|EMBL:KGK39402.1, ECO:0000313|Proteomes:UP000029867};
RN [1] {ECO:0000313|Proteomes:UP000029867}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SD108 {ECO:0000313|Proteomes:UP000029867};
RX PubMed=25159171; DOI=10.1186/s12934-014-0121-4;
RA Xiao H., Shao Z., Jiang Y., Dole S., Zhao H.;
RT "Exploiting Issatchenkia orientalis SD108 for succinic acid production.";
RL Microb. Cell Fact. 13:121-121(2014).
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
CC Nucleus, nucleolus {ECO:0000256|ARBA:ARBA00004604}.
CC -!- SIMILARITY: Belongs to the RNase PH family.
CC {ECO:0000256|ARBA:ARBA00006678}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KGK39402.1}.
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DR EMBL; JQFK01000009; KGK39402.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A099P5E0; -.
DR VEuPathDB; FungiDB:C5L36_0B09620; -.
DR eggNOG; KOG1613; Eukaryota.
DR HOGENOM; CLU_1129834_0_0_1; -.
DR Proteomes; UP000029867; Unassembled WGS sequence.
DR GO; GO:0000177; C:cytoplasmic exosome (RNase complex); IEA:UniProt.
DR GO; GO:0000176; C:nuclear exosome (RNase complex); IEA:UniProt.
DR GO; GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
DR GO; GO:0000467; P:exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IEA:UniProt.
DR GO; GO:0071038; P:nuclear polyadenylation-dependent tRNA catabolic process; IEA:UniProt.
DR GO; GO:0016075; P:rRNA catabolic process; IEA:UniProt.
DR Gene3D; 3.30.230.70; GHMP Kinase, N-terminal domain; 1.
DR InterPro; IPR027408; PNPase/RNase_PH_dom_sf.
DR InterPro; IPR020568; Ribosomal_Su5_D2-typ_SF.
DR PANTHER; PTHR11097:SF9; EXOSOME COMPLEX COMPONENT RRP43; 1.
DR PANTHER; PTHR11097; EXOSOME COMPLEX EXONUCLEASE RIBOSOMAL RNA PROCESSING PROTEIN; 1.
DR SUPFAM; SSF54211; Ribosomal protein S5 domain 2-like; 1.
PE 3: Inferred from homology;
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490}.
SQ SEQUENCE 282 AA; 30965 MW; 063C4F9F71DD85CA CRC64;
MRLDADIIVD EERGNEEEIE LLGGDLLNEN GAVYPVVEIA RGSNAPPGPE EIGLGEQLYA
SILHSGLISR EELRVNVGLQ SMDEKGEVVI ITGDEVGAIK KKFSFVLYAR LEVFGKTGPL
FDQCYAALVK ALRDTKLPNV YLNERESIMR TRGGKRNANV NIQSFDLVCD PTEYRDLKLR
EDRICWASTF GIADMYDAND GGVGEDEEMH GGEMESNSIL LADLEGDAEN DISKRITALS
NGKGEFVSVT IERGNGSPFT SDMIRHALGL AQTRANDMIG KF
//