ID A0A099PDB6_9GAMM Unreviewed; 514 AA.
AC A0A099PDB6;
DT 07-JAN-2015, integrated into UniProtKB/TrEMBL.
DT 07-JAN-2015, sequence version 1.
DT 27-MAR-2024, entry version 30.
DE SubName: Full=Integrase {ECO:0000313|EMBL:KGK42292.1};
GN ORFNames=LH51_08655 {ECO:0000313|EMBL:KGK42292.1}, LH51_18320
GN {ECO:0000313|EMBL:KGK40925.1};
OS Nitrincola sp. A-D6.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Oceanospirillales;
OC Oceanospirillaceae; Nitrincola.
OX NCBI_TaxID=1545442 {ECO:0000313|EMBL:KGK42292.1, ECO:0000313|Proteomes:UP000029924};
RN [1] {ECO:0000313|EMBL:KGK42292.1, ECO:0000313|Proteomes:UP000029924}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=A-D6 {ECO:0000313|EMBL:KGK42292.1,
RC ECO:0000313|Proteomes:UP000029924};
RA Valdes N., Rivera-Araya J., Bijman J., Escudero G L., Demergasso C.,
RA Fernandez S., Ferrer A., Chavez R., Levican G.;
RT "Draft Genome Sequence of the Arsenic-Resistant Bacterium Nitrincola sp.
RT Strain A-D6 Isolated from a Salt Flat in Northern Chile.";
RL Submitted (SEP-2014) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the transposase IS21/IS408/IS1162 family.
CC {ECO:0000256|ARBA:ARBA00009277}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KGK42292.1}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; JRLB01000111; KGK40925.1; -; Genomic_DNA.
DR EMBL; JRLB01000042; KGK42292.1; -; Genomic_DNA.
DR RefSeq; WP_036521513.1; NZ_JRLB01000111.1.
DR AlphaFoldDB; A0A099PDB6; -.
DR STRING; 1545442.LH51_08655; -.
DR OrthoDB; 2065409at2; -.
DR Proteomes; UP000029924; Unassembled WGS sequence.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR017895; HTH_IS408/IS1162_type.
DR InterPro; IPR001584; Integrase_cat-core.
DR InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR NCBIfam; NF033546; transpos_IS21; 1.
DR PANTHER; PTHR35004:SF7; INTEGRASE PROTEIN-RELATED; 1.
DR PANTHER; PTHR35004; TRANSPOSASE RV3428C-RELATED; 1.
DR Pfam; PF13384; HTH_23; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 1.
DR PROSITE; PS50532; HTH_IS408; 1.
DR PROSITE; PS50994; INTEGRASE; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000029924}.
FT DOMAIN 11..92
FT /note="HTH IS408-type"
FT /evidence="ECO:0000259|PROSITE:PS50532"
FT DOMAIN 137..332
FT /note="Integrase catalytic"
FT /evidence="ECO:0000259|PROSITE:PS50994"
SQ SEQUENCE 514 AA; 59197 MW; BD49F5851E3D733C CRC64;
MPAKRLSMRK IKEVLRLKWI NGLSNRQIAA TCGISRPTVS EYLRRTADAG LSWPLPDDLD
DSQLERKLFP PPPNLPAQLR GIPDWSHINY EIRHNKNLTL FLLWQEYRQS NPEGYQYSWF
CEHYRDWQSK LDWVMRQDHR AGEKLFVDYA GQTVPIIDRT TGEIHAAQIF VAVLGASNYT
YAEATWSQTL PDWIGSHIRT FAFLGGVPEL VVPDNLKSGV NKAHRYEPDL NPTYQDMASH
YGVAIVPTRV RKPRDKAKVE GGVLIVERWI LAALRHRQHF SLGQLNATIR ELLKKLNARP
FRKLPGCRAE HFEQLDKPAL QPLPAEHYVY AEWKKARVNI DYHVAVEGHY YSVPYTLIKK
EVQVRLTHNT LECFYKGNRI ASHCRSDQKG RHTTVPAHMP ESHRQAGEWT SERLISWATN
TGPGTESLIR KALSARKHPQ QAFRSCLGIL RLGKAYGDER LEAACRRALL LGSCRYKSIE
SILKHRLDEL PLEEQQELAL PDTHDNIRGP AYYN
//
