ID   A0A099Y0V0_9FLAO        Unreviewed;       493 AA.
AC   A0A099Y0V0;
DT   07-JAN-2015, integrated into UniProtKB/TrEMBL.
DT   07-JAN-2015, sequence version 1.
DT   24-JAN-2024, entry version 24.
DE   SubName: Full=DNA binding protein helix-turn helix protein {ECO:0000313|EMBL:KGL63899.1};
GN   ORFNames=PHEL85_0941 {ECO:0000313|EMBL:KGL63899.1};
OS   Polaribacter sp. Hel1_85.
OC   Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales;
OC   Flavobacteriaceae.
OX   NCBI_TaxID=1250005 {ECO:0000313|EMBL:KGL63899.1, ECO:0000313|Proteomes:UP000029991};
RN   [1] {ECO:0000313|EMBL:KGL63899.1}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Hel1_85 {ECO:0000313|EMBL:KGL63899.1};
RA   Xing P., Hahnke R.L., Unfried F., Markert S., Huang S., Barbeyron T.,
RA   Harder J., Becher D., Schweder T., Gloenk F.O., Amann R.I., Teeling H.;
RT   "Niches of two polysaccharide-degrading Polaribacter strains isolated from
RT   the North Sea during a spring diatom bloom.";
RL   ISME J. 0:0-0(2014).
CC   -!- SIMILARITY: Belongs to the short-chain fatty acyl-CoA assimilation
CC       regulator (ScfR) family. {ECO:0000256|ARBA:ARBA00007227}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:KGL63899.1}.
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DR   EMBL; JPDS01000001; KGL63899.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A099Y0V0; -.
DR   STRING; 1250005.PHEL85_0941; -.
DR   eggNOG; COG3800; Bacteria.
DR   Proteomes; UP000029991; Unassembled WGS sequence.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   CDD; cd00093; HTH_XRE; 1.
DR   Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR   InterPro; IPR001387; Cro/C1-type_HTH.
DR   InterPro; IPR010359; IrrE_HExxH.
DR   InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR   PANTHER; PTHR46797; HTH-TYPE TRANSCRIPTIONAL REGULATOR; 1.
DR   PANTHER; PTHR46797:SF1; METHYLPHOSPHONATE SYNTHASE; 1.
DR   Pfam; PF12844; HTH_19; 1.
DR   Pfam; PF06114; Peptidase_M78; 1.
DR   SMART; SM00530; HTH_XRE; 1.
DR   SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR   PROSITE; PS50943; HTH_CROC1; 1.
PE   3: Inferred from homology;
FT   DOMAIN          15..69
FT                   /note="HTH cro/C1-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50943"
SQ   SEQUENCE   493 AA;  57569 MW;  D1DD1155C8ED5E36 CRC64;
     MIEDEYIRLI FGLKLKQIRT EKNLSLFGLA KLSGLSKSYL NEIEKGKKYP KTDKILSLSE
     SLEIPYDHLV SLKLDKNLAP IGEILQSKIL KEIPLELFGI KENTLIDIVA NAPAKVNAFI
     STIIKIAQNY NLTRESFFLA SLRSYQEAHN NYFEDIENEV EKFAKSYHIN LSKRIKSSDL
     EEILAEEFGY TINNEELEKH QNLEELRNIY IPNKNILLID KNISEAQKTF IYAKEIAYNV
     LNIKERLYTF PWIKFESFDQ VLNNFIASYF AGALIIPRKN LTEKLTNFFA LEEWNSLKLH
     QIINHFNCSQ ETFYQRLTNI LPKFFSIKNL FFLRFTHKQN STEYRLSKEL HITQQQTPHA
     NRNNEHYCRR WVSIKTIQDL ENSKKNRSTF GVQISSYVNQ KNEYLVLSSA TSDPFKKDIS
     RSVSIGMLLS PHLKKKLHFF KEDTFSKKLV GVTCETCAVK NCLERVADST RLEKQIKYDE
     IANTVQNIIK SYS
//