ID A0A099Y590_9FLAO Unreviewed; 447 AA.
AC A0A099Y590;
DT 07-JAN-2015, integrated into UniProtKB/TrEMBL.
DT 07-JAN-2015, sequence version 1.
DT 24-JAN-2024, entry version 26.
DE SubName: Full=Diaminopimelate decarboxylase {ECO:0000313|EMBL:KGL64008.1};
DE EC=4.1.1.20 {ECO:0000313|EMBL:KGL64008.1};
GN ORFNames=PHEL85_1050 {ECO:0000313|EMBL:KGL64008.1};
OS Polaribacter sp. Hel1_85.
OC Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales;
OC Flavobacteriaceae.
OX NCBI_TaxID=1250005 {ECO:0000313|EMBL:KGL64008.1, ECO:0000313|Proteomes:UP000029991};
RN [1] {ECO:0000313|EMBL:KGL64008.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Hel1_85 {ECO:0000313|EMBL:KGL64008.1};
RA Xing P., Hahnke R.L., Unfried F., Markert S., Huang S., Barbeyron T.,
RA Harder J., Becher D., Schweder T., Gloenk F.O., Amann R.I., Teeling H.;
RT "Niches of two polysaccharide-degrading Polaribacter strains isolated from
RT the North Sea during a spring diatom bloom.";
RL ISME J. 0:0-0(2014).
CC -!- COFACTOR:
CC Name=pyridoxal 5'-phosphate; Xref=ChEBI:CHEBI:597326;
CC Evidence={ECO:0000256|ARBA:ARBA00001933};
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KGL64008.1}.
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DR EMBL; JPDS01000001; KGL64008.1; -; Genomic_DNA.
DR RefSeq; WP_036823150.1; NZ_JPDS01000001.1.
DR AlphaFoldDB; A0A099Y590; -.
DR STRING; 1250005.PHEL85_1050; -.
DR eggNOG; COG0019; Bacteria.
DR OrthoDB; 9802241at2; -.
DR Proteomes; UP000029991; Unassembled WGS sequence.
DR GO; GO:0008836; F:diaminopimelate decarboxylase activity; IEA:UniProtKB-EC.
DR CDD; cd06841; PLPDE_III_MccE_like; 1.
DR Gene3D; 3.20.20.10; Alanine racemase; 1.
DR InterPro; IPR009006; Ala_racemase/Decarboxylase_C.
DR InterPro; IPR022643; De-COase2_C.
DR InterPro; IPR022644; De-COase2_N.
DR InterPro; IPR029066; PLP-binding_barrel.
DR PANTHER; PTHR43727; DIAMINOPIMELATE DECARBOXYLASE; 1.
DR PANTHER; PTHR43727:SF2; DIAMINOPIMELATE DECARBOXYLASE 1, CHLOROPLASTIC-RELATED; 1.
DR Pfam; PF02784; Orn_Arg_deC_N; 1.
DR Pfam; PF00278; Orn_DAP_Arg_deC; 1.
DR SUPFAM; SSF50621; Alanine racemase C-terminal domain-like; 1.
DR SUPFAM; SSF51419; PLP-binding barrel; 1.
PE 4: Predicted;
KW Lyase {ECO:0000313|EMBL:KGL64008.1}.
FT DOMAIN 63..309
FT /note="Orn/DAP/Arg decarboxylase 2 N-terminal"
FT /evidence="ECO:0000259|Pfam:PF02784"
FT DOMAIN 310..399
FT /note="Orn/DAP/Arg decarboxylase 2 C-terminal"
FT /evidence="ECO:0000259|Pfam:PF00278"
SQ SEQUENCE 447 AA; 50713 MW; 9F24F5C8920E7900 CRC64;
MSKRIYEHPV LRKVVEGIPN KFGSLKRLQP IATIDTVEID SIISKYGSPV FILSEKTIRQ
TYRTAYRAFS TRYPKVQFAW SYKTNYLDAV CRVYHQEGAW AEVVSGFEYE KAIDNGTPGT
HIIFNGPDKS DEDLIRAINN KSLIHIDHFD ELYSILGLTD KLKERPQVAI RVNMDTGIIP
QWDRFGFNYE NGEAWNAINR ILSSGTIDLI GLHIHIGTYI TVSKAYATAV EKLAALANKT
FDRFNVSIGY IDIGGGFASQ NTLHGAYMPA TDTSPSFDDY AHAITTAMIA ADFPNNETPM
LILETGRALI DDAGWLAGTV LANKRLADGK RSMVIDAGVN LMFTAFWYNH EIYPVHESSF
QSEPTTIYGP LCMNIDVIRK NIDFPMMNKG DHFVIKRVGA YTMTQWMQFI TYRPNIVMID
EKNNVHLVRK AEDKEVFRRQ ELVPEHL
//
