ID A0A0A0AWA9_CHAVO Unreviewed; 1691 AA.
AC A0A0A0AWA9;
DT 07-JAN-2015, integrated into UniProtKB/TrEMBL.
DT 07-JAN-2015, sequence version 1.
DT 24-JAN-2024, entry version 37.
DE SubName: Full=Protein polybromo-1 {ECO:0000313|EMBL:KGL98251.1};
GN ORFNames=N301_15064 {ECO:0000313|EMBL:KGL98251.1};
OS Charadrius vociferus (Killdeer) (Aegialitis vocifera).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Charadriiformes; Charadriidae; Charadrius.
OX NCBI_TaxID=50402 {ECO:0000313|EMBL:KGL98251.1, ECO:0000313|Proteomes:UP000053858};
RN [1] {ECO:0000313|EMBL:KGL98251.1, ECO:0000313|Proteomes:UP000053858}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=BGI_N301 {ECO:0000313|EMBL:KGL98251.1};
RA Zhang G., Li C.;
RT "Genome evolution of avian class.";
RL Submitted (JUN-2014) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR EMBL; KL873339; KGL98251.1; -; Genomic_DNA.
DR RefSeq; XP_009889542.1; XM_009891240.1.
DR STRING; 50402.A0A0A0AWA9; -.
DR GeneID; 104291936; -.
DR KEGG; cvf:104291936; -.
DR CTD; 55193; -.
DR OrthoDB; 2878065at2759; -.
DR Proteomes; UP000053858; Unassembled WGS sequence.
DR GO; GO:0016586; C:RSC-type complex; IEA:InterPro.
DR GO; GO:0003682; F:chromatin binding; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006338; P:chromatin remodeling; IEA:InterPro.
DR CDD; cd04717; BAH_polybromo; 2.
DR CDD; cd05524; Bromo_polybromo_I; 1.
DR CDD; cd05517; Bromo_polybromo_II; 1.
DR CDD; cd05520; Bromo_polybromo_III; 1.
DR CDD; cd05518; Bromo_polybromo_IV; 1.
DR CDD; cd05515; Bromo_polybromo_V; 1.
DR CDD; cd05526; Bromo_polybromo_VI; 1.
DR CDD; cd21984; HMG-box_PB1; 1.
DR Gene3D; 2.30.30.490; -; 2.
DR Gene3D; 1.20.920.10; Bromodomain-like; 6.
DR InterPro; IPR001025; BAH_dom.
DR InterPro; IPR043151; BAH_sf.
DR InterPro; IPR001487; Bromodomain.
DR InterPro; IPR036427; Bromodomain-like_sf.
DR InterPro; IPR018359; Bromodomain_CS.
DR InterPro; IPR009071; HMG_box_dom.
DR InterPro; IPR036910; HMG_box_dom_sf.
DR InterPro; IPR037968; PBRM1_BD5.
DR InterPro; IPR037382; Rsc/polybromo.
DR PANTHER; PTHR16062:SF19; PROTEIN POLYBROMO-1; 1.
DR PANTHER; PTHR16062; SWI/SNF-RELATED; 1.
DR Pfam; PF01426; BAH; 2.
DR Pfam; PF00439; Bromodomain; 6.
DR Pfam; PF00505; HMG_box; 1.
DR PRINTS; PR00503; BROMODOMAIN.
DR SMART; SM00439; BAH; 2.
DR SMART; SM00297; BROMO; 6.
DR SMART; SM00398; HMG; 1.
DR SUPFAM; SSF47370; Bromodomain; 6.
DR SUPFAM; SSF47095; HMG-box; 1.
DR PROSITE; PS51038; BAH; 2.
DR PROSITE; PS00633; BROMODOMAIN_1; 5.
DR PROSITE; PS50014; BROMODOMAIN_2; 6.
DR PROSITE; PS50118; HMG_BOX_2; 1.
PE 4: Predicted;
KW Bromodomain {ECO:0000256|ARBA:ARBA00023117, ECO:0000256|PROSITE-
KW ProRule:PRU00035}; DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00267};
KW Nucleus {ECO:0000256|PROSITE-ProRule:PRU00267};
KW Reference proteome {ECO:0000313|Proteomes:UP000053858}.
FT DOMAIN 65..135
FT /note="Bromo"
FT /evidence="ECO:0000259|PROSITE:PS50014"
FT DOMAIN 201..271
FT /note="Bromo"
FT /evidence="ECO:0000259|PROSITE:PS50014"
FT DOMAIN 403..473
FT /note="Bromo"
FT /evidence="ECO:0000259|PROSITE:PS50014"
FT DOMAIN 541..611
FT /note="Bromo"
FT /evidence="ECO:0000259|PROSITE:PS50014"
FT DOMAIN 679..749
FT /note="Bromo"
FT /evidence="ECO:0000259|PROSITE:PS50014"
FT DOMAIN 820..865
FT /note="Bromo"
FT /evidence="ECO:0000259|PROSITE:PS50014"
FT DOMAIN 959..1077
FT /note="BAH"
FT /evidence="ECO:0000259|PROSITE:PS51038"
FT DOMAIN 1160..1276
FT /note="BAH"
FT /evidence="ECO:0000259|PROSITE:PS51038"
FT DOMAIN 1383..1451
FT /note="HMG box"
FT /evidence="ECO:0000259|PROSITE:PS50118"
FT DNA_BIND 1383..1451
FT /note="HMG box"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00267"
FT REGION 1..40
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 155..178
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 304..337
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 489..521
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 905..945
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1324..1347
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1359..1382
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1435..1462
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1567..1588
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..21
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 304..328
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 905..936
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1324..1339
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1691 AA; 193137 MW; 75224F710389D479 CRC64;
MGSKRRRATS PSSSVSGGDF DDGHHSTNIP GPSRKRRRLS NLPTVDPIAV CHELYNTIRD
YKDEQGRLLC ELFIRAPKRR NQPDYYEVVS QPIDLMKIQQ KLKMEEYDDV NVLTADFQLL
FNNAKAYYKP DSPEYKAACK LWELYLRTKN EFVQKGDAEE EDEDEDGHDN QGANSELSSP
GYLKEILEQL LEAVAVATNP SGRLISELFQ KLPSKVQYPD YYAIIKEPID LKTIAQRIQN
GTYKSIHAMA KDIDLLAKNA KTYNEPGSQV FKDANAIKKI FNMKKAEIEH SELAKSSLRI
RTPSNLTASK LTGPSSQGKG SVGDERNSSN KYYRNKRSAQ GDRLSAITMA LQYGSESDED
AALAAAARYE EGESEAESIT SFMDTSNPLY QLYDTVRSCR NNQGQLISEP FFHLPSKKKY
PDYYQQIKAP ISLQQIRTKL KNHEYETLDQ LEADLNLMFE NAKRYNVPNS AIYKRVLKMQ
QVMQAKKKEL ARRDDIEDGD SMISSATSDT GSSKRKSKKN IRKQRMKILY NAVLEAREPG
TGRRLCDLFM VKPSKKDYPD YYKIILEPMD LKMIEHNIRN DKYIGEEAMI EDMKLMFRNA
RHYNEEGSQV YNDAHMLEKI LKEKRKELGP LAEDDDVASP KLKLSRKSGI SPKKSKYMTP
MQQKLNEVYE AVKNYTDKRG RRLSAIFLRL PSRSELPDYY VTIKKPVDME KIRSHMMANK
YQDIDSMVED FVMMFNNACT YNEPESLIYK DALVLHKVLL ETRREIEGDE DSHVPNVTLL
IQELIHNLFV SVMSHQDDEG RCYSDSLAEI PAVDPNFPNK PPLTFDIIRK NVENNRYRRL
DLFQENMFEV LERARRMNRT DSEIYEDAVE LQQFFIKIRD ELCKNGEILL SPALSYTTKH
LHNDVEKEKK EKLPKEIEED KLKREEEKRE AEKSEDSSGS AGLSSLHRTY SQDCSFKNSM
YHVGDYVYVE PAEANLQPHI VCIERLWEDS AGEKWLYGCW FYRPNETFHL ATRKFLEKEV
FKSDYYNKVP VSKILGKCVV MFVKEYFKLC PENFRDEDVY VCESRYSAKT KSFKKIKLWT
MPVSSVRFVP RDVPLPVVRV ASVFANADKV DEEKHAETLE DSKVGEGILH LEKDKEDVPV
EMSNGEPGCH YFEQLCYNDM WLKVGDCVFI KSHGLVRPRV GRIEKMWVRD GAAYFFGPIF
IHPEETEHEP TKMFYKKEVF LSNLEETCPM TCILGKCAVL SFKDFLSCRP TEISENDVFL
CESRYNESDK QMKKFKGLKR FSLSAKVVDD EIYYFRKPIV PQKEPSPLLE KKIQQLEAKF
AELEGGDEDM EEMGEEEGDM TETPSMPQLQ TPLASELDIM PYTPPQSTPK SVKGSTKKEG
SKRKINMSGY ILFSSEMRAV IKAQHPDYSF GELSRLVGTE WRNLEATKKA EYEERAAKVA
EQQERERAAQ QQNSSPRAGT PVGALMGVVP PPTPMGMLNQ QLTPVAGMIS GYPPVLPPLQ
GPVDGIVSMG SMQPLHPGVP PPHQLPPGMP GIPGIPPPGV IGQNVSPMVG TPAPGASPFG
QQIGILGPPG QQAPPPYPGQ SPASQPVMQQ PTTPMFVSPP PKTQRLLHSE AYLKYIEGLS
AESNSISKWD QTLAARRRDV HLSKEQESRL PSHWLKSKGA HTTMADALWR LRDLMLRDTL
NIRQAYNIEN V
//
