ID A0A0A0K978_CUCSA Unreviewed; 845 AA.
AC A0A0A0K978;
DT 07-JAN-2015, integrated into UniProtKB/TrEMBL.
DT 07-JAN-2015, sequence version 1.
DT 27-MAR-2024, entry version 34.
DE RecName: Full=Pre-mRNA-processing protein 40C {ECO:0008006|Google:ProtNLM};
GN ORFNames=Csa_7G447710 {ECO:0000313|EMBL:KGN45409.1};
OS Cucumis sativus (Cucumber).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis.
OX NCBI_TaxID=3659 {ECO:0000313|EMBL:KGN45409.1, ECO:0000313|Proteomes:UP000029981};
RN [1] {ECO:0000313|EMBL:KGN45409.1, ECO:0000313|Proteomes:UP000029981}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. 9930 {ECO:0000313|Proteomes:UP000029981};
RX PubMed=19881527; DOI=10.1038/ng.475;
RA Huang S., Li R., Zhang Z., Li L., Gu X., Fan W., Lucas W.J., Wang X.,
RA Xie B., Ni P., Ren Y., Zhu H., Li J., Lin K., Jin W., Fei Z., Li G.,
RA Staub J., Kilian A., van der Vossen E.A., Wu Y., Guo J., He J., Jia Z.,
RA Ren Y., Tian G., Lu Y., Ruan J., Qian W., Wang M., Huang Q., Li B.,
RA Xuan Z., Cao J., Asan null, Wu Z., Zhang J., Cai Q., Bai Y., Zhao B.,
RA Han Y., Li Y., Li X., Wang S., Shi Q., Liu S., Cho W.K., Kim J.Y., Xu Y.,
RA Heller-Uszynska K., Miao H., Cheng Z., Zhang S., Wu J., Yang Y., Kang H.,
RA Li M., Liang H., Ren X., Shi Z., Wen M., Jian M., Yang H., Zhang G.,
RA Yang Z., Chen R., Liu S., Li J., Ma L., Liu H., Zhou Y., Zhao J., Fang X.,
RA Li G., Fang L., Li Y., Liu D., Zheng H., Zhang Y., Qin N., Li Z., Yang G.,
RA Yang S., Bolund L., Kristiansen K., Zheng H., Li S., Zhang X., Yang H.,
RA Wang J., Sun R., Zhang B., Jiang S., Wang J., Du Y., Li S.;
RT "The genome of the cucumber, Cucumis sativus L.";
RL Nat. Genet. 41:1275-1281(2009).
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DR EMBL; CM002928; KGN45409.1; -; Genomic_DNA.
DR RefSeq; XP_011659583.1; XM_011661281.1.
DR AlphaFoldDB; A0A0A0K978; -.
DR STRING; 3659.A0A0A0K978; -.
DR EnsemblPlants; KGN45409; KGN45409; Csa_7G447710.
DR GeneID; 101216726; -.
DR Gramene; KGN45409; KGN45409; Csa_7G447710.
DR KEGG; csv:101216726; -.
DR eggNOG; KOG0155; Eukaryota.
DR OMA; KTRGEKX; -.
DR OrthoDB; 2882240at2759; -.
DR Proteomes; UP000029981; Chromosome 7.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0070063; F:RNA polymerase binding; IBA:GO_Central.
DR GO; GO:0003712; F:transcription coregulator activity; IBA:GO_Central.
DR CDD; cd00201; WW; 2.
DR Gene3D; 2.20.70.10; -; 2.
DR Gene3D; 1.10.10.440; FF domain; 5.
DR InterPro; IPR002713; FF_domain.
DR InterPro; IPR036517; FF_domain_sf.
DR InterPro; IPR045148; TCRG1-like.
DR InterPro; IPR001202; WW_dom.
DR InterPro; IPR036020; WW_dom_sf.
DR PANTHER; PTHR15377; TRANSCRIPTION ELONGATION REGULATOR 1; 1.
DR PANTHER; PTHR15377:SF3; WW DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF01846; FF; 4.
DR Pfam; PF00397; WW; 1.
DR SMART; SM00441; FF; 4.
DR SMART; SM00456; WW; 2.
DR SUPFAM; SSF81698; FF domain; 5.
DR SUPFAM; SSF51045; WW domain; 2.
DR PROSITE; PS51676; FF; 4.
DR PROSITE; PS01159; WW_DOMAIN_1; 2.
DR PROSITE; PS50020; WW_DOMAIN_2; 2.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000029981}.
FT DOMAIN 223..256
FT /note="WW"
FT /evidence="ECO:0000259|PROSITE:PS50020"
FT DOMAIN 281..308
FT /note="WW"
FT /evidence="ECO:0000259|PROSITE:PS50020"
FT DOMAIN 444..499
FT /note="FF"
FT /evidence="ECO:0000259|PROSITE:PS51676"
FT DOMAIN 512..567
FT /note="FF"
FT /evidence="ECO:0000259|PROSITE:PS51676"
FT DOMAIN 577..634
FT /note="FF"
FT /evidence="ECO:0000259|PROSITE:PS51676"
FT DOMAIN 683..740
FT /note="FF"
FT /evidence="ECO:0000259|PROSITE:PS51676"
FT REGION 1..36
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 312..361
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 380..444
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 639..668
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 705..730
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 812..845
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..32
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 321..351
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 380..397
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 410..425
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 426..444
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 706..730
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 812..829
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 845 AA; 94068 MW; FBEBED2E4DD67BDD CRC64;
MSSASTVSQS VSLPAPPTSN SAANGSSIPN LIPSTSPVPP APSFHIHQLP SVAPMVPGPP
GMSPSMPLVS TGPAVLFPPT DSASTIPGPN MHAIHNPIHP SARPQICGSY PSLTPVVSPP
HAMWFQPPQL GAMPRPPFLP YSTSYHGPLP FPARGMPLPS VPLPDPQPPG VTPVQVASGI
SVPSGHGNQL IGNTLIQTDS NHPELDSHKH AQGVGHSENI SLNKHSEDWT AHKTEAGIIY
YYNALTGEST YEKPSGFRGE AENLMAQATS VSMSNLSGTD WVLVTMGDGK KYYYNNKTKI
SSWQIPNEVS ELRQQNDEKT KELSAPLPNN NASTDLGTSS TSINTPAINT GGREATPLRT
VGISGSSSAL DLIKKKLQDS GTPVASSPIS APTVAQSDVN LPRDADATVK ALQTENKDKP
KDANADGNVS DSSSDSEDVD SGPTNEQLII QFKEMLKERG VAPFSKWDKE LPKIVFDPRF
KAIPSYSARR SLFEHYVKTR AEEERKEKRA AQKAAIEGFK QLLDSASEDI DHTTSYQTFK
KKWGNDSRFE ALDRKDRENL LNERVLCLKK AAVEKAQALW AASTTSFKSM LQEREDININ
SRWFRVKDSL REDPRYRSVK HEEREMLFNE YISELKAAEE EKQRESKARK EEQEKLKERE
REWRKRKERE EQEMERVRLK VRKKEAVASF QALLVESIKD PQASWTESKV KLEKDPQGRA
SNTDLDSSET EKLFREHVKM LQERCANEFR NLLSESFTAE VVAQVSEDGK TVLNSWTMAK
RILKPDPRYG KVPRKEREAL WRRYADDTVR KQKLANDHKG EKYNDYKNRA TTDAGKFPSK
PRIHD
//
