ID A0A0A0L4F4_CUCSA Unreviewed; 895 AA.
AC A0A0A0L4F4;
DT 07-JAN-2015, integrated into UniProtKB/TrEMBL.
DT 07-JAN-2015, sequence version 1.
DT 27-MAR-2024, entry version 40.
DE RecName: Full=DYW domain-containing protein {ECO:0000259|Pfam:PF14432};
GN ORFNames=Csa_3G126920 {ECO:0000313|EMBL:KGN56628.1};
OS Cucumis sativus (Cucumber).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis.
OX NCBI_TaxID=3659 {ECO:0000313|EMBL:KGN56628.1, ECO:0000313|Proteomes:UP000029981};
RN [1] {ECO:0000313|EMBL:KGN56628.1, ECO:0000313|Proteomes:UP000029981}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. 9930 {ECO:0000313|Proteomes:UP000029981};
RX PubMed=19881527; DOI=10.1038/ng.475;
RA Huang S., Li R., Zhang Z., Li L., Gu X., Fan W., Lucas W.J., Wang X.,
RA Xie B., Ni P., Ren Y., Zhu H., Li J., Lin K., Jin W., Fei Z., Li G.,
RA Staub J., Kilian A., van der Vossen E.A., Wu Y., Guo J., He J., Jia Z.,
RA Ren Y., Tian G., Lu Y., Ruan J., Qian W., Wang M., Huang Q., Li B.,
RA Xuan Z., Cao J., Asan null, Wu Z., Zhang J., Cai Q., Bai Y., Zhao B.,
RA Han Y., Li Y., Li X., Wang S., Shi Q., Liu S., Cho W.K., Kim J.Y., Xu Y.,
RA Heller-Uszynska K., Miao H., Cheng Z., Zhang S., Wu J., Yang Y., Kang H.,
RA Li M., Liang H., Ren X., Shi Z., Wen M., Jian M., Yang H., Zhang G.,
RA Yang Z., Chen R., Liu S., Li J., Ma L., Liu H., Zhou Y., Zhao J., Fang X.,
RA Li G., Fang L., Li Y., Liu D., Zheng H., Zhang Y., Qin N., Li Z., Yang G.,
RA Yang S., Bolund L., Kristiansen K., Zheng H., Li S., Zhang X., Yang H.,
RA Wang J., Sun R., Zhang B., Jiang S., Wang J., Du Y., Li S.;
RT "The genome of the cucumber, Cucumis sativus L.";
RL Nat. Genet. 41:1275-1281(2009).
CC -!- SIMILARITY: Belongs to the PPR family. PCMP-H subfamily.
CC {ECO:0000256|ARBA:ARBA00006643}.
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DR EMBL; CM002924; KGN56628.1; -; Genomic_DNA.
DR RefSeq; XP_004134352.2; XM_004134304.2.
DR AlphaFoldDB; A0A0A0L4F4; -.
DR STRING; 3659.A0A0A0L4F4; -.
DR EnsemblPlants; KGN56628; KGN56628; Csa_3G126920.
DR GeneID; 101218589; -.
DR Gramene; KGN56628; KGN56628; Csa_3G126920.
DR KEGG; csv:101218589; -.
DR eggNOG; KOG4197; Eukaryota.
DR OMA; GMYGEGK; -.
DR OrthoDB; 458755at2759; -.
DR Proteomes; UP000029981; Chromosome 3.
DR GO; GO:0043231; C:intracellular membrane-bounded organelle; IBA:GO_Central.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0009451; P:RNA modification; IBA:GO_Central.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 6.
DR InterPro; IPR032867; DYW_dom.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 5.
DR PANTHER; PTHR47928:SF190; OS04G0110500 PROTEIN; 1.
DR PANTHER; PTHR47928; REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED; 1.
DR Pfam; PF14432; DYW_deaminase; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF01535; PPR; 4.
DR Pfam; PF13041; PPR_2; 5.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS51375; PPR; 5.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000029981};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 85..119
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 186..220
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 287..321
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 387..421
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 588..622
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT DOMAIN 803..895
FT /note="DYW"
FT /evidence="ECO:0000259|Pfam:PF14432"
SQ SEQUENCE 895 AA; 100536 MW; 8CB0C6EE88F9B8D5 CRC64;
MKPPKFCSNF NNTPEPSQEF LRSSLLKTLS SAKNTPQLRT VHSLIITSGL SLSVIFSGKL
ISKYAQVKDP ISSVSVFRSI SPTNNVYLWN SIIRALTHNG LFTQALGYYT EMREKKLQPD
AFTFPSVINS CARILDLELG CIVHEHAMEM GFESDLYIGN ALIDMYSRFV DLDNARYVFE
EMSNRDSVSW NSLISGYCSN GFWEDALDMY HKFRMTGMVP DCFTMSSVLL ACGSLMAVKE
GVAVHGVIEK IGIAGDVIIG NGLLSMYFKF ERLREARRVF SKMAVKDSVT WNTMICGYAQ
LGRHEASVKL FMDMIDGFVP DMLSITSTIR ACGQSGDLQV GKFVHKYLIG SGFECDTVAC
NILIDMYAKC GDLLAAQEVF DTTKCKDSVT WNSLINGYTQ SGYYKEGLES FKMMKMERKP
DSVTFVLLLS IFSQLADINQ GRGIHCDVIK FGFEAELIIG NSLLDVYAKC GEMDDLLKVF
SYMSAHDIIS WNTVIASSVH FDDCTVGFQM INEMRTEGLM PDEATVLGIL PMCSLLAVRR
QGKEIHGYIF KSGFESNVPI GNALIEMYSK CGSLENCIKV FKYMKEKDVV TWTALISAFG
MYGEGKKALK AFQDMELSGV LPDSVAFIAF IFACSHSGMV KEGLRFFDRM KTDYNLEPRM
EHYACVVDLL ARSGLLAQAE EFILSMPMKP DASLWGALLS ACRARGNTNI AQRVSKKILE
LNSDDTGYYV LVSNIYATLG KWDQVKTVRN SMKTKGLKKE PGSSWIEIQK RVYVFRTGDK
SFEQYDKVKD LLEYLVRLMA KEGYVADLQF ALHDVEEDDK RDMLCGHSER LAIAFGLLNT
KPGSPLLVMK NLRVCGDCHT VTKYITKIMQ REILVRDANR FHRFKDGACS CGDHW
//
