ID A0A0A1FFL2_9BURK Unreviewed; 563 AA.
AC A0A0A1FFL2;
DT 04-FEB-2015, integrated into UniProtKB/TrEMBL.
DT 04-FEB-2015, sequence version 1.
DT 27-MAR-2024, entry version 31.
DE SubName: Full=Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor {ECO:0000313|EMBL:AIY41637.1};
GN ORFNames=LT85_2479 {ECO:0000313|EMBL:AIY41637.1};
OS Collimonas arenae.
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Oxalobacteraceae; Collimonas.
OX NCBI_TaxID=279058 {ECO:0000313|EMBL:AIY41637.1, ECO:0000313|Proteomes:UP000030302};
RN [1] {ECO:0000313|EMBL:AIY41637.1, ECO:0000313|Proteomes:UP000030302}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Cal35 {ECO:0000313|EMBL:AIY41637.1,
RC ECO:0000313|Proteomes:UP000030302};
RA Uroz S., Tech J.J., Sawaya N.A., Frey-Klett P., Leveau J.H.J.;
RT "Structure and function of bacterial communities in ageing soils: insights
RT from the Mendocino ecological staircase.";
RL Soil Biol. Biochem. 69:265-274(2014).
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-
CC pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
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DR EMBL; CP009962; AIY41637.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0A1FFL2; -.
DR STRING; 279058.LT85_2479; -.
DR KEGG; care:LT85_2479; -.
DR HOGENOM; CLU_000445_134_1_4; -.
DR Proteomes; UP000030302; Chromosome.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-KW.
DR GO; GO:0007165; P:signal transduction; IEA:InterPro.
DR CDD; cd01949; GGDEF; 1.
DR CDD; cd06225; HAMP; 1.
DR CDD; cd18773; PDC1_HK_sensor; 1.
DR CDD; cd18774; PDC2_HK_sensor; 1.
DR Gene3D; 3.30.70.270; -; 1.
DR Gene3D; 6.10.340.10; -; 1.
DR Gene3D; 3.30.450.20; PAS domain; 1.
DR InterPro; IPR033479; dCache_1.
DR InterPro; IPR000160; GGDEF_dom.
DR InterPro; IPR003660; HAMP_dom.
DR InterPro; IPR029787; Nucleotide_cyclase.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR NCBIfam; TIGR00254; GGDEF; 1.
DR PANTHER; PTHR46663; DIGUANYLATE CYCLASE DGCT-RELATED; 1.
DR PANTHER; PTHR46663:SF3; DIGUANYLATE CYCLASE DGCT-RELATED; 1.
DR Pfam; PF02743; dCache_1; 1.
DR Pfam; PF00990; GGDEF; 1.
DR Pfam; PF00672; HAMP; 1.
DR SMART; SM00267; GGDEF; 1.
DR SMART; SM00304; HAMP; 1.
DR SUPFAM; SSF158472; HAMP domain-like; 1.
DR SUPFAM; SSF55073; Nucleotide cyclase; 1.
DR PROSITE; PS50887; GGDEF; 1.
DR PROSITE; PS50885; HAMP; 1.
PE 4: Predicted;
KW Cell membrane {ECO:0000256|ARBA:ARBA00022475};
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW ECO:0000256|SAM:Phobius}.
FT TRANSMEM 289..309
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 311..363
FT /note="HAMP"
FT /evidence="ECO:0000259|PROSITE:PS50885"
FT DOMAIN 406..540
FT /note="GGDEF"
FT /evidence="ECO:0000259|PROSITE:PS50887"
SQ SEQUENCE 563 AA; 60875 MW; D0DFEA6F6C19E5B7 CRC64;
MMNFQSLKFR IIALGVTLVV LGIGLRLVFA LPFAQDQLRD LAASQQLSIA SYIAHDIDHS
IVARQTLIGE LAGILPPALV RRPDELTAWL KERERLNPLF NGGLLVIHPD GNGTLASYPA
ATGREDLDFS GREWFQAALK ADAPVMSRPQ REQAGGDPII IMAAPVRDAS MRVVAVLAGV
ASLDAPGFLD RLQENQLGAT GGFLLISPAD KLFVGASDPS MILKPTPPQG VNLLHDRAMA
GYRGVGVTVN AEGVEELSAM ASVPSTGWFV VARMPTAEAF RPIAALRGFW LKSTLLVLVV
TLAILLFMLP RILRPLTEAA QAMREMADGE FELRPLPVRR NDEVGSLALG FNYLVARLRE
KEAALRASQD RMEFMAHHDA LTGLFNRPML EDRLQQAVAR AEHNGTRFAL LFCDLDGFKP
VNDRYGHNVG DAVLVQVATR FSEGRRQIDT VARLGGDEFV ILLADLDDAH LDAVSVARHY
LATIGAPYDV GGITFTLSIS IGIALPQGPS LSGSQILSQA DMAMYQAKRA GKNQFCLFDE
ETGDCVAEPS SAAQALDVPT RAA
//
