ID A0A0A1YMX9_9PSED Unreviewed; 491 AA.
AC A0A0A1YMX9;
DT 04-FEB-2015, integrated into UniProtKB/TrEMBL.
DT 04-FEB-2015, sequence version 1.
DT 27-MAR-2024, entry version 40.
DE SubName: Full=Fis family transcriptional regulator {ECO:0000313|EMBL:KFX71270.1};
GN ORFNames=TMS3_0104910 {ECO:0000313|EMBL:KFX71270.1};
OS Pseudomonas taeanensis MS-3.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
OC Pseudomonadaceae; Pseudomonas.
OX NCBI_TaxID=1395571 {ECO:0000313|EMBL:KFX71270.1, ECO:0000313|Proteomes:UP000030063};
RN [1] {ECO:0000313|EMBL:KFX71270.1, ECO:0000313|Proteomes:UP000030063}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MS-3 {ECO:0000313|EMBL:KFX71270.1,
RC ECO:0000313|Proteomes:UP000030063};
RX PubMed=24407626;
RA Lee S.Y., Kim S.H., Lee D.G., Shin S., Yun S.H., Choi C.W., Chung Y.H.,
RA Choi J.S., Kahng H.Y., Kim S.I.;
RT "Draft Genome Sequence of Petroleum Oil-Degrading Marine Bacterium
RT Pseudomonas taeanensis Strain MS-3, Isolated from a Crude Oil-Contaminated
RT Seashore.";
RL Genome Announc. 2:0-0(2014).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KFX71270.1}.
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DR EMBL; AWSQ01000001; KFX71270.1; -; Genomic_DNA.
DR RefSeq; WP_025164110.1; NZ_AWSQ01000001.1.
DR AlphaFoldDB; A0A0A1YMX9; -.
DR STRING; 1395571.TMS3_0104910; -.
DR eggNOG; COG3829; Bacteria.
DR OrthoDB; 9804019at2; -.
DR Proteomes; UP000030063; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 3.30.450.20; PAS domain; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR002197; HTH_Fis.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR002078; Sigma_54_int.
DR InterPro; IPR025662; Sigma_54_int_dom_ATP-bd_1.
DR InterPro; IPR025943; Sigma_54_int_dom_ATP-bd_2.
DR PANTHER; PTHR32071; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR PANTHER; PTHR32071:SF99; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR Pfam; PF02954; HTH_8; 1.
DR Pfam; PF00158; Sigma54_activat; 1.
DR PRINTS; PR01590; HTHFIS.
DR SMART; SM00382; AAA; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 1.
DR PROSITE; PS00675; SIGMA54_INTERACT_1; 1.
DR PROSITE; PS00676; SIGMA54_INTERACT_2; 1.
DR PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000030063};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 168..398
FT /note="Sigma-54 factor interaction"
FT /evidence="ECO:0000259|PROSITE:PS50045"
SQ SEQUENCE 491 AA; 53267 MW; 88FE058FE4E58C64 CRC64;
MAISSEDLDQ HGLIVGVSPE RFRAVAMPLL FDHLNAQCEG TIAVNRQARI VWINDKYAAK
VGISDPHNVL GMEVEQVLPA SKLREVVDSG QPSMLDLMAF GSEHFVVTRI PLRDEDGTLV
GALGFVLFDR ARHLKPLMAK FNVLQNELLA TQSELAKARR ARYTIAGFIG AGAAASEVKR
QARRAAQLNA TVLLRGETGT GKELLAQGIH NLSPRANGPF VAVNVAAIPE TLVEAELFGT
APGAFTGADR KARIGKFEVA NGGTLFLDEI GDLPLALQAK LLRVLQEQEV EPLGSNQVKS
LNVRVIAATH INLEAKVAAG QFRDDLYYRL NVLALHVPPL RERCEDIPTL VEHLLDDIAN
RSGQAPMELS REALALLTRQ AWKGNVRELR NLLERAQLDA EGPLLDAAQL QPLLTTRGLT
AQAQSTEPLD TAPVKGAPLP LLAESMAQAE RQAIQQALAA CNGNRRRAAS ELGISRASLY
NKLQHHGLSQ R
//
