ID A0A0A1YP70_9PSED Unreviewed; 313 AA.
AC A0A0A1YP70;
DT 04-FEB-2015, integrated into UniProtKB/TrEMBL.
DT 04-FEB-2015, sequence version 1.
DT 24-JAN-2024, entry version 35.
DE SubName: Full=Nodulation protein NfeD {ECO:0000313|EMBL:KFX71732.1};
GN ORFNames=TMS3_0107385 {ECO:0000313|EMBL:KFX71732.1};
OS Pseudomonas taeanensis MS-3.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
OC Pseudomonadaceae; Pseudomonas.
OX NCBI_TaxID=1395571 {ECO:0000313|EMBL:KFX71732.1, ECO:0000313|Proteomes:UP000030063};
RN [1] {ECO:0000313|EMBL:KFX71732.1, ECO:0000313|Proteomes:UP000030063}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MS-3 {ECO:0000313|EMBL:KFX71732.1,
RC ECO:0000313|Proteomes:UP000030063};
RX PubMed=24407626;
RA Lee S.Y., Kim S.H., Lee D.G., Shin S., Yun S.H., Choi C.W., Chung Y.H.,
RA Choi J.S., Kahng H.Y., Kim S.I.;
RT "Draft Genome Sequence of Petroleum Oil-Degrading Marine Bacterium
RT Pseudomonas taeanensis Strain MS-3, Isolated from a Crude Oil-Contaminated
RT Seashore.";
RL Genome Announc. 2:0-0(2014).
CC -!- SIMILARITY: Belongs to the LysR transcriptional regulatory family.
CC {ECO:0000256|ARBA:ARBA00009437}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KFX71732.1}.
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DR EMBL; AWSQ01000001; KFX71732.1; -; Genomic_DNA.
DR RefSeq; WP_025164581.1; NZ_AWSQ01000001.1.
DR AlphaFoldDB; A0A0A1YP70; -.
DR STRING; 1395571.TMS3_0107385; -.
DR eggNOG; COG0583; Bacteria.
DR OrthoDB; 8720143at2; -.
DR Proteomes; UP000030063; Unassembled WGS sequence.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR CDD; cd08462; PBP2_NodD; 1.
DR Gene3D; 3.40.190.10; Periplasmic binding protein-like II; 2.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR005119; LysR_subst-bd.
DR InterPro; IPR037416; NodD_PBP2.
DR InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR30118:SF6; HTH-TYPE TRANSCRIPTIONAL REGULATOR LEUO; 1.
DR PANTHER; PTHR30118; HTH-TYPE TRANSCRIPTIONAL REGULATOR LEUO-RELATED; 1.
DR Pfam; PF00126; HTH_1; 1.
DR Pfam; PF03466; LysR_substrate; 1.
DR SUPFAM; SSF53850; Periplasmic binding protein-like II; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS50931; HTH_LYSR; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000030063}.
FT DOMAIN 6..63
FT /note="HTH lysR-type"
FT /evidence="ECO:0000259|PROSITE:PS50931"
SQ SEQUENCE 313 AA; 36156 MW; 2B281F4B36DB4462 CRC64;
MRFHHLDLNL LVALDVLLEE QNITHAATRL HMTQSATSGV LARLRTYFDD DLLVQVGRKM
MPTPLARELE LPVREVLMTI QSSITARPVH QPAESKRHFR IAASDYVISV MLAKAFQQIA
EQAPHITFEM LAFGDTAFDL LTRGAVEMLI IPEHYLTESH PSHLLFEEEH VCVVWAGNKT
VGERISIEQY LEMGHITVGL GRSRRITIED FFMSQYKCTR RLEVITHDFN TLPQLVVGTE
RIVTMHRRLA ELYAQHYPLR IIPTPVPLPL MQEHLVWHRS MDRDPMLRWV REQIIKTAQA
MPPCEPYEIS MPT
//
