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Database: UniProt
Entry: A0A0A5I013_9VIBR
LinkDB: A0A0A5I013_9VIBR
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ID   A0A0A5I013_9VIBR        Unreviewed;       607 AA.
AC   A0A0A5I013;
DT   04-FEB-2015, integrated into UniProtKB/TrEMBL.
DT   04-FEB-2015, sequence version 1.
DT   20-DEC-2017, entry version 23.
DE   RecName: Full=Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463};
GN   Name=secD {ECO:0000256|HAMAP-Rule:MF_01463,
GN   ECO:0000313|EMBL:KGY09111.1};
GN   ORFNames=NM06_07560 {ECO:0000313|EMBL:KGY09111.1};
OS   Vibrio sinaloensis.
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales;
OC   Vibrionaceae; Vibrio; Vibrio oreintalis group.
OX   NCBI_TaxID=379097 {ECO:0000313|EMBL:KGY09111.1, ECO:0000313|Proteomes:UP000030451};
RN   [1] {ECO:0000313|EMBL:KGY09111.1, ECO:0000313|Proteomes:UP000030451}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=T08 {ECO:0000313|EMBL:KGY09111.1,
RC   ECO:0000313|Proteomes:UP000030451};
RA   Chan K.-G., Mohamad N.I.;
RT   "Genome sequencing of Vibrio sinaloensis T08.";
RL   Submitted (OCT-2014) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Part of the Sec protein translocase complex. Interacts
CC       with the SecYEG preprotein conducting channel. SecDF uses the
CC       proton motive force (PMF) to complete protein translocation after
CC       the ATP-dependent function of SecA. {ECO:0000256|HAMAP-
CC       Rule:MF_01463, ECO:0000256|SAAS:SAAS00541769}.
CC   -!- SUBUNIT: Forms a complex with SecF. Part of the essential Sec
CC       protein translocation apparatus which comprises SecA, SecYEG and
CC       auxiliary proteins SecDF-YajC and YidC. {ECO:0000256|HAMAP-
CC       Rule:MF_01463}.
CC   -!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000256|HAMAP-
CC       Rule:MF_01463}; Multi-pass membrane protein {ECO:0000256|HAMAP-
CC       Rule:MF_01463}.
CC   -!- SIMILARITY: Belongs to the SecD/SecF family. SecD subfamily.
CC       {ECO:0000256|HAMAP-Rule:MF_01463}.
CC   -!- CAUTION: Lacks conserved residue(s) required for the propagation
CC       of feature annotation. {ECO:0000256|HAMAP-Rule:MF_01463}.
CC   -!- CAUTION: The sequence shown here is derived from an
CC       EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is
CC       preliminary data. {ECO:0000313|EMBL:KGY09111.1}.
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DR   EMBL; JRWP01000008; KGY09111.1; -; Genomic_DNA.
DR   EnsemblBacteria; KGY09111; KGY09111; NM06_07560.
DR   eggNOG; ENOG4107QN8; Bacteria.
DR   eggNOG; COG0342; LUCA.
DR   Proteomes; UP000030451; Unassembled WGS sequence.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0005622; C:intracellular; IEA:GOC.
DR   GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0015450; F:P-P-bond-hydrolysis-driven protein transmembrane transporter activity; IEA:InterPro.
DR   GO; GO:0065002; P:intracellular protein transmembrane transport; IEA:UniProtKB-UniRule.
DR   GO; GO:0006605; P:protein targeting; IEA:UniProtKB-UniRule.
DR   GO; GO:0043952; P:protein transport by the Sec complex; IEA:UniProtKB-UniRule.
DR   HAMAP; MF_01463_B; SecD_B; 1.
DR   InterPro; IPR001036; Acrflvin-R.
DR   InterPro; IPR005791; SecD.
DR   InterPro; IPR027398; SecD-TM.
DR   InterPro; IPR022813; SecD/SecF_arch_bac.
DR   InterPro; IPR022645; SecD/SecF_bac.
DR   InterPro; IPR022646; SecD/SecF_CS.
DR   Pfam; PF07549; Sec_GG; 1.
DR   Pfam; PF13721; SecD-TM1; 1.
DR   Pfam; PF02355; SecD_SecF; 1.
DR   PRINTS; PR00702; ACRIFLAVINRP.
DR   TIGRFAMs; TIGR00916; 2A0604s01; 1.
DR   TIGRFAMs; TIGR01129; secD; 1.
PE   3: Inferred from homology;
KW   Cell membrane {ECO:0000256|HAMAP-Rule:MF_01463,
KW   ECO:0000256|SAAS:SAAS00425060};
KW   Complete proteome {ECO:0000313|Proteomes:UP000030451};
KW   Membrane {ECO:0000256|HAMAP-Rule:MF_01463,
KW   ECO:0000256|SAAS:SAAS00284057};
KW   Protein transport {ECO:0000256|HAMAP-Rule:MF_01463,
KW   ECO:0000256|SAAS:SAAS00425133};
KW   Translocation {ECO:0000256|HAMAP-Rule:MF_01463,
KW   ECO:0000256|SAAS:SAAS00425069};
KW   Transmembrane {ECO:0000256|HAMAP-Rule:MF_01463,
KW   ECO:0000256|SAAS:SAAS00425065};
KW   Transmembrane helix {ECO:0000256|HAMAP-Rule:MF_01463,
KW   ECO:0000256|SAAS:SAAS00425143};
KW   Transport {ECO:0000256|HAMAP-Rule:MF_01463,
KW   ECO:0000256|SAAS:SAAS00425109}.
FT   TRANSMEM    444    464       Helical. {ECO:0000256|HAMAP-Rule:
FT                                MF_01463}.
FT   TRANSMEM    469    489       Helical. {ECO:0000256|HAMAP-Rule:
FT                                MF_01463}.
FT   TRANSMEM    495    517       Helical. {ECO:0000256|HAMAP-Rule:
FT                                MF_01463}.
FT   TRANSMEM    538    562       Helical. {ECO:0000256|HAMAP-Rule:
FT                                MF_01463}.
FT   TRANSMEM    574    597       Helical. {ECO:0000256|HAMAP-Rule:
FT                                MF_01463}.
FT   DOMAIN        1     92       SecD-TM1. {ECO:0000259|Pfam:PF13721}.
SQ   SEQUENCE   607 AA;  65271 MW;  F29E17C0C5F24F71 CRC64;
     MVVLTIAVAA LYALPNIYGE DPAIQVTGAR GASVDMSTLD SVTQALDKQG LSHKSIALEN
     GSILVRFNDT DTQISARDVI NEALGKDKIV ALNLAPATPD WLESIGANPM KLGLDLRGGV
     HFLMEVDMDA AMEKLVGQQE EAFRSELREA KLRYRAIRPA GKDGVEVLLR NAEQLAEAEA
     LLKKNHPDMI FVDSDSNGRF ALTATFTEQR LTEIRNYAVE QNITILRNRV NELGVAEPLV
     QRQGASRIVV ELPGVQDTAR AKEILGATAT LEFREVDSQA DLAAAANGRA PAGSEIKQDR
     DGRPVVLKKR VILGGQSITD ASSSVDEYGR PQVNISLDSE GGNKMAAFSR QNIGKLMATV
     FAEYKDSGRR TPEGRVILNK HEEVINQATI QSALGRNFRI TGIDSAAEAH NLALLLRAGA
     LIAPISIVEE RTIGPSMGQQ NIDMGIQAMI WGMVAVMLFT LVYYRKFGLI ANVALMANLV
     LIIGVMSMIP GATMTLPGIA GIVLTVGMAV DANVLIFERI REELRDGRSP QQAIHQGYAN
     AFSTIADANI TTLITAIILF AVGTGAIKGF AVTLSIGILT SMFTAIVGTR CIVNLAYGGK
     RINKLSI
//
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