ID A0A0A5JG87_9VIBR Unreviewed; 613 AA.
AC A0A0A5JG87;
DT 04-FEB-2015, integrated into UniProtKB/TrEMBL.
DT 04-FEB-2015, sequence version 1.
DT 28-MAR-2018, entry version 26.
DE RecName: Full=Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463};
GN Name=secD {ECO:0000256|HAMAP-Rule:MF_01463,
GN ECO:0000313|EMBL:KGY06978.1};
GN ORFNames=NM06_19830 {ECO:0000313|EMBL:KGY06978.1};
OS Vibrio sinaloensis.
OC Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales;
OC Vibrionaceae; Vibrio; Vibrio oreintalis group.
OX NCBI_TaxID=379097 {ECO:0000313|EMBL:KGY06978.1, ECO:0000313|Proteomes:UP000030451};
RN [1] {ECO:0000313|EMBL:KGY06978.1, ECO:0000313|Proteomes:UP000030451}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=T08 {ECO:0000313|EMBL:KGY06978.1,
RC ECO:0000313|Proteomes:UP000030451};
RA Chan K.-G., Mohamad N.I.;
RT "Genome sequencing of Vibrio sinaloensis T08.";
RL Submitted (OCT-2014) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Part of the Sec protein translocase complex. Interacts
CC with the SecYEG preprotein conducting channel. SecDF uses the
CC proton motive force (PMF) to complete protein translocation after
CC the ATP-dependent function of SecA. {ECO:0000256|HAMAP-
CC Rule:MF_01463, ECO:0000256|SAAS:SAAS00541769}.
CC -!- SUBUNIT: Forms a complex with SecF. Part of the essential Sec
CC protein translocation apparatus which comprises SecA, SecYEG and
CC auxiliary proteins SecDF-YajC and YidC. {ECO:0000256|HAMAP-
CC Rule:MF_01463}.
CC -!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000256|HAMAP-
CC Rule:MF_01463}; Multi-pass membrane protein {ECO:0000256|HAMAP-
CC Rule:MF_01463}.
CC -!- SIMILARITY: Belongs to the SecD/SecF family. SecD subfamily.
CC {ECO:0000256|HAMAP-Rule:MF_01463}.
CC -!- CAUTION: Lacks conserved residue(s) required for the propagation
CC of feature annotation. {ECO:0000256|HAMAP-Rule:MF_01463}.
CC -!- CAUTION: The sequence shown here is derived from an
CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is
CC preliminary data. {ECO:0000313|EMBL:KGY06978.1}.
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DR EMBL; JRWP01000059; KGY06978.1; -; Genomic_DNA.
DR RefSeq; WP_038193257.1; NZ_JRWP01000059.1.
DR EnsemblBacteria; KGY06978; KGY06978; NM06_19830.
DR Proteomes; UP000030451; Unassembled WGS sequence.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005622; C:intracellular; IEA:GOC.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0015450; F:P-P-bond-hydrolysis-driven protein transmembrane transporter activity; IEA:InterPro.
DR GO; GO:0065002; P:intracellular protein transmembrane transport; IEA:UniProtKB-UniRule.
DR GO; GO:0006605; P:protein targeting; IEA:UniProtKB-UniRule.
DR GO; GO:0043952; P:protein transport by the Sec complex; IEA:UniProtKB-UniRule.
DR HAMAP; MF_01463_B; SecD_B; 1.
DR InterPro; IPR005791; SecD.
DR InterPro; IPR027398; SecD-TM.
DR InterPro; IPR022813; SecD/SecF_arch_bac.
DR InterPro; IPR022645; SecD/SecF_bac.
DR InterPro; IPR022646; SecD/SecF_CS.
DR Pfam; PF07549; Sec_GG; 1.
DR Pfam; PF13721; SecD-TM1; 1.
DR Pfam; PF02355; SecD_SecF; 1.
DR TIGRFAMs; TIGR00916; 2A0604s01; 1.
DR TIGRFAMs; TIGR01129; secD; 1.
PE 3: Inferred from homology;
KW Cell membrane {ECO:0000256|HAMAP-Rule:MF_01463,
KW ECO:0000256|SAAS:SAAS00425060};
KW Complete proteome {ECO:0000313|Proteomes:UP000030451};
KW Membrane {ECO:0000256|HAMAP-Rule:MF_01463,
KW ECO:0000256|SAAS:SAAS00284057};
KW Protein transport {ECO:0000256|HAMAP-Rule:MF_01463,
KW ECO:0000256|SAAS:SAAS00425133};
KW Reference proteome {ECO:0000313|Proteomes:UP000030451};
KW Translocation {ECO:0000256|HAMAP-Rule:MF_01463,
KW ECO:0000256|SAAS:SAAS00425069};
KW Transmembrane {ECO:0000256|HAMAP-Rule:MF_01463,
KW ECO:0000256|SAAS:SAAS00425065};
KW Transmembrane helix {ECO:0000256|HAMAP-Rule:MF_01463,
KW ECO:0000256|SAAS:SAAS00425143};
KW Transport {ECO:0000256|HAMAP-Rule:MF_01463,
KW ECO:0000256|SAAS:SAAS00425109}.
FT TRANSMEM 451 470 Helical. {ECO:0000256|HAMAP-Rule:
FT MF_01463}.
FT TRANSMEM 477 499 Helical. {ECO:0000256|HAMAP-Rule:
FT MF_01463}.
FT TRANSMEM 505 523 Helical. {ECO:0000256|HAMAP-Rule:
FT MF_01463}.
FT TRANSMEM 544 569 Helical. {ECO:0000256|HAMAP-Rule:
FT MF_01463}.
FT TRANSMEM 575 599 Helical. {ECO:0000256|HAMAP-Rule:
FT MF_01463}.
FT DOMAIN 15 110 SecD-TM1. {ECO:0000259|Pfam:PF13721}.
SQ SEQUENCE 613 AA; 66706 MW; D729FD5375AC282F CRC64;
MKRNMANKAK NARVMNRYSA WKYVVLVVTI VLLALSAIPT WYGEQPSIQV TTSQGGGVLN
NPAELNRYLD QHNIKADRIV QQGNSTTLVF EDETQQTHAR EVLNTLIGKE DSITFSYVSV
APEWMGELGF SPIKLGLDLR GGVQFLLNVD IDKAFEEQRN VLMDEMRDML RQERIRGVKF
AEVGVDGFDV KSEAGESLSR VATYLKQNYP GWDVKRHSDY LAVKPTQQNK TEFQTITITQ
NLKIMRDRIE ELGITEAAVQ RQGEHSIRIE LPGVQDPSQA KNVIGATATL AFHEAKSPSE
GVSYGDIVLQ DNDGRDVVLA KRAVLTGEHI VNARAGIDKM GFSEVNISLD HAGGKIMSDF
SGSHIGKPMA TVYSEYTTNA KGETERSERV ISVATIQSQL GSQFRITGAG SMEDAQNLAL
LLRAGSLTAP VTIVEERTIG ASLGAENIQN GFAALGLGLA MTLTFMALWY RRLGWVANVA
LLINMVSLLG LIALLPGAVL TLPGIAGLVL TVGMAVDTNV LIFERIKDKL AEGRTFAQSI
DLGFGSALST ILDANITTMI TAVVLYSIGN GPIQGFALTL GLGLLTSMFS GVFASRAIIN
LVWGRDSRRD VRV
//
