GenomeNet

Database: UniProt
Entry: A0A0A5JG87_9VIBR
LinkDB: A0A0A5JG87_9VIBR
Original site: A0A0A5JG87_9VIBR 
ID   A0A0A5JG87_9VIBR        Unreviewed;       613 AA.
AC   A0A0A5JG87;
DT   04-FEB-2015, integrated into UniProtKB/TrEMBL.
DT   04-FEB-2015, sequence version 1.
DT   28-MAR-2018, entry version 26.
DE   RecName: Full=Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463};
GN   Name=secD {ECO:0000256|HAMAP-Rule:MF_01463,
GN   ECO:0000313|EMBL:KGY06978.1};
GN   ORFNames=NM06_19830 {ECO:0000313|EMBL:KGY06978.1};
OS   Vibrio sinaloensis.
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales;
OC   Vibrionaceae; Vibrio; Vibrio oreintalis group.
OX   NCBI_TaxID=379097 {ECO:0000313|EMBL:KGY06978.1, ECO:0000313|Proteomes:UP000030451};
RN   [1] {ECO:0000313|EMBL:KGY06978.1, ECO:0000313|Proteomes:UP000030451}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=T08 {ECO:0000313|EMBL:KGY06978.1,
RC   ECO:0000313|Proteomes:UP000030451};
RA   Chan K.-G., Mohamad N.I.;
RT   "Genome sequencing of Vibrio sinaloensis T08.";
RL   Submitted (OCT-2014) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Part of the Sec protein translocase complex. Interacts
CC       with the SecYEG preprotein conducting channel. SecDF uses the
CC       proton motive force (PMF) to complete protein translocation after
CC       the ATP-dependent function of SecA. {ECO:0000256|HAMAP-
CC       Rule:MF_01463, ECO:0000256|SAAS:SAAS00541769}.
CC   -!- SUBUNIT: Forms a complex with SecF. Part of the essential Sec
CC       protein translocation apparatus which comprises SecA, SecYEG and
CC       auxiliary proteins SecDF-YajC and YidC. {ECO:0000256|HAMAP-
CC       Rule:MF_01463}.
CC   -!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000256|HAMAP-
CC       Rule:MF_01463}; Multi-pass membrane protein {ECO:0000256|HAMAP-
CC       Rule:MF_01463}.
CC   -!- SIMILARITY: Belongs to the SecD/SecF family. SecD subfamily.
CC       {ECO:0000256|HAMAP-Rule:MF_01463}.
CC   -!- CAUTION: Lacks conserved residue(s) required for the propagation
CC       of feature annotation. {ECO:0000256|HAMAP-Rule:MF_01463}.
CC   -!- CAUTION: The sequence shown here is derived from an
CC       EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is
CC       preliminary data. {ECO:0000313|EMBL:KGY06978.1}.
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution-NoDerivs License
CC   -----------------------------------------------------------------------
DR   EMBL; JRWP01000059; KGY06978.1; -; Genomic_DNA.
DR   RefSeq; WP_038193257.1; NZ_JRWP01000059.1.
DR   EnsemblBacteria; KGY06978; KGY06978; NM06_19830.
DR   Proteomes; UP000030451; Unassembled WGS sequence.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0005622; C:intracellular; IEA:GOC.
DR   GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0015450; F:P-P-bond-hydrolysis-driven protein transmembrane transporter activity; IEA:InterPro.
DR   GO; GO:0065002; P:intracellular protein transmembrane transport; IEA:UniProtKB-UniRule.
DR   GO; GO:0006605; P:protein targeting; IEA:UniProtKB-UniRule.
DR   GO; GO:0043952; P:protein transport by the Sec complex; IEA:UniProtKB-UniRule.
DR   HAMAP; MF_01463_B; SecD_B; 1.
DR   InterPro; IPR005791; SecD.
DR   InterPro; IPR027398; SecD-TM.
DR   InterPro; IPR022813; SecD/SecF_arch_bac.
DR   InterPro; IPR022645; SecD/SecF_bac.
DR   InterPro; IPR022646; SecD/SecF_CS.
DR   Pfam; PF07549; Sec_GG; 1.
DR   Pfam; PF13721; SecD-TM1; 1.
DR   Pfam; PF02355; SecD_SecF; 1.
DR   TIGRFAMs; TIGR00916; 2A0604s01; 1.
DR   TIGRFAMs; TIGR01129; secD; 1.
PE   3: Inferred from homology;
KW   Cell membrane {ECO:0000256|HAMAP-Rule:MF_01463,
KW   ECO:0000256|SAAS:SAAS00425060};
KW   Complete proteome {ECO:0000313|Proteomes:UP000030451};
KW   Membrane {ECO:0000256|HAMAP-Rule:MF_01463,
KW   ECO:0000256|SAAS:SAAS00284057};
KW   Protein transport {ECO:0000256|HAMAP-Rule:MF_01463,
KW   ECO:0000256|SAAS:SAAS00425133};
KW   Reference proteome {ECO:0000313|Proteomes:UP000030451};
KW   Translocation {ECO:0000256|HAMAP-Rule:MF_01463,
KW   ECO:0000256|SAAS:SAAS00425069};
KW   Transmembrane {ECO:0000256|HAMAP-Rule:MF_01463,
KW   ECO:0000256|SAAS:SAAS00425065};
KW   Transmembrane helix {ECO:0000256|HAMAP-Rule:MF_01463,
KW   ECO:0000256|SAAS:SAAS00425143};
KW   Transport {ECO:0000256|HAMAP-Rule:MF_01463,
KW   ECO:0000256|SAAS:SAAS00425109}.
FT   TRANSMEM    451    470       Helical. {ECO:0000256|HAMAP-Rule:
FT                                MF_01463}.
FT   TRANSMEM    477    499       Helical. {ECO:0000256|HAMAP-Rule:
FT                                MF_01463}.
FT   TRANSMEM    505    523       Helical. {ECO:0000256|HAMAP-Rule:
FT                                MF_01463}.
FT   TRANSMEM    544    569       Helical. {ECO:0000256|HAMAP-Rule:
FT                                MF_01463}.
FT   TRANSMEM    575    599       Helical. {ECO:0000256|HAMAP-Rule:
FT                                MF_01463}.
FT   DOMAIN       15    110       SecD-TM1. {ECO:0000259|Pfam:PF13721}.
SQ   SEQUENCE   613 AA;  66706 MW;  D729FD5375AC282F CRC64;
     MKRNMANKAK NARVMNRYSA WKYVVLVVTI VLLALSAIPT WYGEQPSIQV TTSQGGGVLN
     NPAELNRYLD QHNIKADRIV QQGNSTTLVF EDETQQTHAR EVLNTLIGKE DSITFSYVSV
     APEWMGELGF SPIKLGLDLR GGVQFLLNVD IDKAFEEQRN VLMDEMRDML RQERIRGVKF
     AEVGVDGFDV KSEAGESLSR VATYLKQNYP GWDVKRHSDY LAVKPTQQNK TEFQTITITQ
     NLKIMRDRIE ELGITEAAVQ RQGEHSIRIE LPGVQDPSQA KNVIGATATL AFHEAKSPSE
     GVSYGDIVLQ DNDGRDVVLA KRAVLTGEHI VNARAGIDKM GFSEVNISLD HAGGKIMSDF
     SGSHIGKPMA TVYSEYTTNA KGETERSERV ISVATIQSQL GSQFRITGAG SMEDAQNLAL
     LLRAGSLTAP VTIVEERTIG ASLGAENIQN GFAALGLGLA MTLTFMALWY RRLGWVANVA
     LLINMVSLLG LIALLPGAVL TLPGIAGLVL TVGMAVDTNV LIFERIKDKL AEGRTFAQSI
     DLGFGSALST ILDANITTMI TAVVLYSIGN GPIQGFALTL GLGLLTSMFS GVFASRAIIN
     LVWGRDSRRD VRV
//
DBGET integrated database retrieval system