ID A0A0B0ESJ4_9BACT Unreviewed; 342 AA.
AC A0A0B0ESJ4;
DT 04-MAR-2015, integrated into UniProtKB/TrEMBL.
DT 04-MAR-2015, sequence version 1.
DT 27-MAR-2024, entry version 44.
DE SubName: Full=Sigma-54 dependent transcriptional regulator {ECO:0000313|EMBL:KHE94113.1};
GN Name=anfA {ECO:0000313|EMBL:KHE94113.1};
GN Synonyms=nifA {ECO:0000313|EMBL:KHE94113.1};
GN ORFNames=SCABRO_00133 {ECO:0000313|EMBL:KHE94113.1};
OS Candidatus Scalindua brodae.
OC Bacteria; Planctomycetota; Candidatus Brocadiia; Candidatus Brocadiales;
OC Candidatus Scalinduaceae; Scalindua.
OX NCBI_TaxID=237368 {ECO:0000313|EMBL:KHE94113.1, ECO:0000313|Proteomes:UP000030652};
RN [1] {ECO:0000313|EMBL:KHE94113.1, ECO:0000313|Proteomes:UP000030652}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=RU1 {ECO:0000313|EMBL:KHE94113.1};
RA Speth D.R., Russ L., Kartal B., Op den Camp H.J., Dutilh B.E., Jetten M.S.;
RT "Draft genome of anammox bacterium scalindua brodae, obtained using
RT differential coverage binning of sequence data from two enrichment
RT reactors.";
RL Submitted (OCT-2014) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KHE94113.1}.
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DR EMBL; JRYO01000015; KHE94113.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0B0ESJ4; -.
DR eggNOG; COG2204; Bacteria.
DR Proteomes; UP000030652; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 3.30.450.20; PAS domain; 1.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR000700; PAS-assoc_C.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR002078; Sigma_54_int.
DR InterPro; IPR025662; Sigma_54_int_dom_ATP-bd_1.
DR PANTHER; PTHR32071:SF57; SIGMA L-DEPENDENT TRANSCRIPTIONAL REGULATOR YQIR-RELATED; 1.
DR PANTHER; PTHR32071; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR Pfam; PF00158; Sigma54_activat; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 1.
DR PROSITE; PS50113; PAC; 1.
DR PROSITE; PS00675; SIGMA54_INTERACT_1; 1.
DR PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 40..92
FT /note="PAC"
FT /evidence="ECO:0000259|PROSITE:PS50113"
FT DOMAIN 161..249
FT /note="Sigma-54 factor interaction"
FT /evidence="ECO:0000259|PROSITE:PS50045"
FT COILED 83..117
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 342 AA; 39855 MW; 8BDEB545D437909A CRC64;
MAYVFNDVEG TSYLKLLLKS KEKELAKNLN NVIKTKKTFN IRELRITSPD NVTHFFDKSC
VPIFDKDGSI HGVLSISKNV TKRVNKEIQY QQSQKMLEDL THELNIKNDK IRRLQTTLGE
RYRFHNLIGK NYMMQNIYNL IDRVSQTDST ILITGETGTG KELVARAIHY NSLRKDLFYR
LNIISIRLPS LKERADDISL LVNHFIEKFN NRFKKNISGT SPRVLRKFMS YSWPGNIREL
EGVIEKAVLL EEYDTIENIE LLTDHSENPN LLLSPLNSVP DISSYDAMQE YLDNIEKEYF
IKVFKKHKGK ISDVAEFTGL NGRTILNKMK KFSIKKSMFK DR
//
