ID A0A0B2RI04_GLYSO Unreviewed; 1875 AA.
AC A0A0B2RI04;
DT 04-MAR-2015, integrated into UniProtKB/TrEMBL.
DT 04-MAR-2015, sequence version 1.
DT 24-JAN-2024, entry version 27.
DE SubName: Full=Pentatricopeptide repeat-containing protein, chloroplastic {ECO:0000313|EMBL:KHN34221.1};
GN ORFNames=glysoja_043287 {ECO:0000313|EMBL:KHN34221.1};
OS Glycine soja (Wild soybean).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3848 {ECO:0000313|EMBL:KHN34221.1};
RN [1] {ECO:0000313|EMBL:KHN34221.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC TISSUE=Root {ECO:0000313|EMBL:KHN34221.1};
RA Lam H.-M., Qi X., Li M.-W., Liu X., Xie M., Ni M., Xu X.;
RT "Identification of a novel salt tolerance gene in wild soybean by whole-
RT genome sequencing.";
RL Submitted (JUL-2014) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC {ECO:0000256|ARBA:ARBA00007626}.
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DR EMBL; KN649128; KHN34221.1; -; Genomic_DNA.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 12.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR033443; PPR_long.
DR InterPro; IPR002625; Smr_dom.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 24.
DR PANTHER; PTHR47447; OS03G0856100 PROTEIN; 1.
DR PANTHER; PTHR47447:SF18; PENTATRICOPEPTIDE (PPR) REPEAT PROTEIN; 1.
DR Pfam; PF01535; PPR; 5.
DR Pfam; PF13041; PPR_2; 7.
DR Pfam; PF13812; PPR_3; 2.
DR Pfam; PF17177; PPR_long; 3.
DR SMART; SM00463; SMR; 2.
DR SUPFAM; SSF48452; TPR-like; 2.
DR PROSITE; PS51375; PPR; 28.
DR PROSITE; PS50828; SMR; 2.
PE 3: Inferred from homology;
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 155..189
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 190..224
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 260..294
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 295..329
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 330..364
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 365..399
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 479..513
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 514..548
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 549..583
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 584..618
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 619..653
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 654..688
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 689..723
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 725..759
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 760..794
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT DOMAIN 907..954
FT /note="Smr"
FT /evidence="ECO:0000259|PROSITE:PS50828"
FT REPEAT 1018..1052
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 1053..1087
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 1123..1157
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 1158..1192
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 1193..1223
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 1229..1263
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 1343..1377
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 1442..1476
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 1477..1511
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 1512..1546
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 1547..1581
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 1583..1617
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 1618..1652
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT DOMAIN 1764..1846
FT /note="Smr"
FT /evidence="ECO:0000259|PROSITE:PS50828"
FT REGION 53..98
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1875 AA; 210451 MW; 35DF66D13A2D7746 CRC64;
MAQPYPLCPS PSASSFSFHS RIPFFTIVPS HSKTLLHAPR FSLQPVNTLQ DAKLDDPDAK
SPSLSKNSIW VNPRSPRAKH LQKNSPHARS SSLTKLAKSL DSCNPTEQHV SEILNVLRDN
VSERDAVFIL NTMVNPNTAL LALKYFQPKI NPAKHVVLYN VTLKVLREVK DFEGAEKLFD
EMLQRGVEPN LITFSTIISS ASVCSLPDKA IKWFEKMPSF GVEPDASVGS FMIHAYAHSG
KADMALELYD RAKAEKWRVD TVAFSVLIKM CGMLENFDGC LSVYNDMKVL GAKPNMVTYN
TLLYAMGRAK RALDAKAIYE EMISNGFSPN WPTHAALLQA YCKARFCEDA LGVYKEMKKK
GMDVNLFLYN LLFDMCADVG CMDEAVEIFE DMKSSGTCQP DNFTYSCLIN MYSSHLKRTD
SLESSNPWEQ QVSTILKGLG DNVSEGDVIF ILNRMVDPNT ASFVLRYFQN MVNFTRDKEV
ILYNVVINLF RKSRDFEGAE KLFDEMLQRG VKPDNITFST LVNCASLSGL PNKAVELFEK
MSGFGCEPDG ITCSGMVYAY ARTNNVDKAV NLYDRAKAEN WSLDAVTFST LIKMYSMAGN
YDKCLEVYQE MKVLGVKPNV ATYNTLLGAM LRSKKHRQAK AIHKEMKSNG VSPDFITYAS
LLEVYTRAQC SEDALGVYKE MKGNGMNMTA DLYNKLLAMC ADVGYTDRAV EIFYEMKSSG
TCQPDSWTFS SLITIYSRSG KVSEVEGMLN EMIQSGFQPT IFVMTSLIRC YGKAKRTDDV
VKIFKQLLDL GIVPNDHFCC CLLNVLTQTP KEELGKLTDC IEKANTKLGT VVRYLVEEQE
SDEGFRKETL ELLNSIDAEV KKPLCNCLID LCVKLNVPER ACGLLDLGLM LEIYKNIQSK
SQTQWSLHLK ELSVGAAMTA LHVWINDLSE ALESGEDLPP LLGINTGQGK HKSSSLTKLA
KSLDSCNPTQ QHVSEILRVL GDNVFESDAV VILNSMVNPY TALLAVNYFN QKIKPSRHVV
LYNVTLKLFR AVRDFEGEEK VFDEMLQRGV NPNLITFSTI ISSASMFSLP HKAIEFFEKM
PSFGVQPDAG LTSFMIHAYA CSWNADMALE LYDRAKAERW RVDTAAFLAL IKMFGKFDNF
DGCLRVYNDM KVLGTKPIKE TYDTLLYVMG RAKRAGDAKA IYEEMISNGF SPNWPTYAAL
LEAYCKARCH EDALRVYKEM KKEKGMNVDV FLYNLLFDMC ADVGCMDEAV EIFEDMKSSR
TCQPDNFTYS CLINMYSSHL KQTESLESSN PWEQQVSTIL KGIGDMVSEG DVIFILNKMV
NPNTASFVLR YFLNKINFTT DKELILYNAT LNLFRKSRDF EGAEKLFDEM LQRGVKPNNF
TFSTMVNCAN KPVELFEKMS GFGYEPDGIT CSAMVYAYAL SNNVDKAVSL YDRAIAEKWC
LDAAAFSALI KMYSMAGNYD RCLKIYQEMK VLGVKPNVVT YNTLLGAMLK AEKHRQAKAI
YKEMRSNGVS PDFITYACLL EVYTIAHYSE DALGVYKEMK GNGMDMTADL YNKLLAMYAD
MGYIDRAVEI FYEMNSSGTC QPDSWTFASL IAIYSRSGKV SEAEGMLNEM IQSGFQPTIF
VLTSLVHCYG KAKRTDDVVK VFKQLLELGI VPNDHFCCSL LNVLTQAPKE ELGKLTDCIE
KANTKLGSVV KYLVEEEGDG DFRNEVSEFL NSIDAEVKMP LCNCLIDLCV KLNVPERACD
LLDLGLMLEI YKNIQSKSQT QWSLHLKELS VGAAMTALHV WINDLSKALE SGEDLPPLLG
INTGKGKHKY SEKGLAGIFE SHLKELNAPF HEAKAGWFLA TKAPAKSWLE SRGSIADLNF
ELYGFGCSNN DPKYR
//