ID A0A0B2UL69_9MICR Unreviewed; 247 AA.
AC A0A0B2UL69;
DT 04-MAR-2015, integrated into UniProtKB/TrEMBL.
DT 04-MAR-2015, sequence version 1.
DT 27-MAR-2024, entry version 28.
DE SubName: Full=Rrp4-like RNA-binding protein {ECO:0000313|EMBL:KHN69725.1};
GN ORFNames=M896_051340 {ECO:0000313|EMBL:KHN69725.1};
OS Ordospora colligata OC4.
OC Eukaryota; Fungi; Fungi incertae sedis; Microsporidia; Ordosporidae;
OC Ordospora.
OX NCBI_TaxID=1354746 {ECO:0000313|EMBL:KHN69725.1, ECO:0000313|Proteomes:UP000031056};
RN [1] {ECO:0000313|EMBL:KHN69725.1, ECO:0000313|Proteomes:UP000031056}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=OC4 {ECO:0000313|EMBL:KHN69725.1,
RC ECO:0000313|Proteomes:UP000031056};
RA Pombert J.-F., Haag K.L., Beidas S., Ebert D., Keeling P.J.;
RT "The Ordospora colligata genome; evolution of extreme reduction in
RT microsporidia and host-to-parasite horizontal gene transfer.";
RL MBio 0:0-0(2014).
CC -!- SIMILARITY: Belongs to the RRP4 family.
CC {ECO:0000256|ARBA:ARBA00009155}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KHN69725.1}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; JOKQ01000005; KHN69725.1; -; Genomic_DNA.
DR RefSeq; XP_014563767.1; XM_014708281.1.
DR AlphaFoldDB; A0A0B2UL69; -.
DR STRING; 1354746.A0A0B2UL69; -.
DR GeneID; 26261787; -.
DR VEuPathDB; MicrosporidiaDB:M896_051340; -.
DR HOGENOM; CLU_034114_1_0_1; -.
DR InParanoid; A0A0B2UL69; -.
DR OrthoDB; 5472588at2759; -.
DR Proteomes; UP000031056; Unassembled WGS sequence.
DR GO; GO:0000178; C:exosome (RNase complex); IEA:UniProtKB-KW.
DR GO; GO:0005634; C:nucleus; IEA:UniProt.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR CDD; cd05789; S1_Rrp4; 1.
DR Gene3D; 2.40.50.100; -; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR InterPro; IPR025721; Exosome_cplx_N_dom.
DR InterPro; IPR026699; Exosome_RNA_bind1/RRP40/RRP4.
DR InterPro; IPR004088; KH_dom_type_1.
DR InterPro; IPR036612; KH_dom_type_1_sf.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR048565; RRP4_S1.
DR PANTHER; PTHR21321:SF4; EXOSOME COMPLEX COMPONENT RRP4; 1.
DR PANTHER; PTHR21321; PNAS-3 RELATED; 1.
DR Pfam; PF14382; ECR1_N; 1.
DR Pfam; PF15985; KH_6; 1.
DR Pfam; PF21266; RRP4_S1; 1.
DR SUPFAM; SSF54791; Eukaryotic type KH-domain (KH-domain type I); 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR SUPFAM; SSF110324; Ribosomal L27 protein-like; 1.
PE 3: Inferred from homology;
KW Exosome {ECO:0000256|ARBA:ARBA00022835};
KW Reference proteome {ECO:0000313|Proteomes:UP000031056};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884};
KW rRNA processing {ECO:0000256|ARBA:ARBA00022552}.
FT DOMAIN 30..66
FT /note="Exosome complex component N-terminal"
FT /evidence="ECO:0000259|Pfam:PF14382"
FT DOMAIN 79..151
FT /note="RRP4 S1"
FT /evidence="ECO:0000259|Pfam:PF21266"
FT DOMAIN 173..213
FT /note="K Homology"
FT /evidence="ECO:0000259|Pfam:PF15985"
SQ SEQUENCE 247 AA; 27345 MW; FDB23EB468312A02 CRC64;
MSEIAVDAEF VDKNEFNNSE GNRARANNVF LPGDELIDAD GYIRGHGTHM RGKSITSTYF
GNMKVTNKLV TVDPIVPLKY LPQVGDVVIG RVSVIQSKKW KLEVNSACDV CLSLSAINLP
GAVQRRKLES DEIVMRSFFD VGDLVVSEVQ KVSKGGMVAL HARNEKYGKL SDGILVIVPY
FLLDLLKTRF LSRSGIDVIV GCNGYIWIGA KDKYKSCRDV SCLASSIRNA VEFGMRIDIE
KLLYSND
//
