ID A0A0B4XKS1_9GAMM Unreviewed; 289 AA.
AC A0A0B4XKS1;
DT 01-APR-2015, integrated into UniProtKB/TrEMBL.
DT 01-APR-2015, sequence version 1.
DT 24-JAN-2024, entry version 28.
DE RecName: Full=HTH cro/C1-type domain-containing protein {ECO:0000259|SMART:SM00530};
GN ORFNames=S7S_03755 {ECO:0000313|EMBL:AJD47173.1};
OS Isoalcanivorax pacificus W11-5.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Oceanospirillales;
OC Alcanivoracaceae; Isoalcanivorax.
OX NCBI_TaxID=391936 {ECO:0000313|EMBL:AJD47173.1, ECO:0000313|Proteomes:UP000006764};
RN [1] {ECO:0000313|EMBL:AJD47173.1, ECO:0000313|Proteomes:UP000006764}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=W11-5 {ECO:0000313|EMBL:AJD47173.1,
RC ECO:0000313|Proteomes:UP000006764};
RX PubMed=23209202; DOI=10.1128/JB.01845-12;
RA Lai Q., Shao Z.;
RT "Genome sequence of an alkane-degrading bacterium, Alcanivorax pacificus
RT type strain W11-5, isolated from deep sea sediment.";
RL J. Bacteriol. 194:6936-6936(2012).
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DR EMBL; CP004387; AJD47173.1; -; Genomic_DNA.
DR RefSeq; WP_008738161.1; NZ_CP004387.1.
DR AlphaFoldDB; A0A0B4XKS1; -.
DR STRING; 391936.S7S_03755; -.
DR KEGG; apac:S7S_03755; -.
DR HOGENOM; CLU_047530_3_1_6; -.
DR OrthoDB; 9790252at2; -.
DR Proteomes; UP000006764; Chromosome.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR CDD; cd00093; HTH_XRE; 1.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR InterPro; IPR001387; Cro/C1-type_HTH.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR InterPro; IPR025194; RodZ-like_C.
DR PANTHER; PTHR34475; -; 1.
DR PANTHER; PTHR34475:SF1; CYTOSKELETON PROTEIN RODZ; 1.
DR Pfam; PF13413; HTH_25; 1.
DR Pfam; PF13464; RodZ_C; 1.
DR SMART; SM00530; HTH_XRE; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000006764};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 104..123
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 12..73
FT /note="HTH cro/C1-type"
FT /evidence="ECO:0000259|SMART:SM00530"
FT REGION 1..23
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 133..207
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 289 AA; 30873 MW; 5470FF94FCFF6E30 CRC64;
MTEQQPNLPG ARLRTERKRQ NLSEQDVSAR LHLSMTYLKA LESDDYERLP QAAFVKGYVR
NYARLLGLPA EDLVRDFQTL VQDRGDDKLV SPVHMVMRER GPGWLWPAVI IAVAVVIGLG
WWGTRSMGLP DELPGLSTPQ ATLPAPPGSV DEDAALPAPQ PQEPMNVEAP SEALPEENDA
GAPGVSAPEA PAVGAPPAGP TELAMNEPPP LDVLQVSFGG NCWVQVTDAS GEEIYQGQQR
SGGQLALEGE APFRVTLGNA AAVTVLQFNG ETQSLPTAAP GRVIRITVP
//
