ID A0A0B4XM39_9GAMM Unreviewed; 90 AA.
AC A0A0B4XM39;
DT 01-APR-2015, integrated into UniProtKB/TrEMBL.
DT 01-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 35.
DE RecName: Full=Cold shock-like protein CspD {ECO:0000256|ARBA:ARBA00022318};
GN ORFNames=S7S_08935 {ECO:0000313|EMBL:AJD48201.1};
OS Isoalcanivorax pacificus W11-5.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Oceanospirillales;
OC Alcanivoracaceae; Isoalcanivorax.
OX NCBI_TaxID=391936 {ECO:0000313|EMBL:AJD48201.1, ECO:0000313|Proteomes:UP000006764};
RN [1] {ECO:0000313|EMBL:AJD48201.1, ECO:0000313|Proteomes:UP000006764}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=W11-5 {ECO:0000313|EMBL:AJD48201.1,
RC ECO:0000313|Proteomes:UP000006764};
RX PubMed=23209202; DOI=10.1128/JB.01845-12;
RA Lai Q., Shao Z.;
RT "Genome sequence of an alkane-degrading bacterium, Alcanivorax pacificus
RT type strain W11-5, isolated from deep sea sediment.";
RL J. Bacteriol. 194:6936-6936(2012).
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|ARBA:ARBA00004496,
CC ECO:0000256|RuleBase:RU000408}.
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DR EMBL; CP004387; AJD48201.1; -; Genomic_DNA.
DR RefSeq; WP_008737652.1; NZ_CP004387.1.
DR AlphaFoldDB; A0A0B4XM39; -.
DR STRING; 391936.S7S_08935; -.
DR KEGG; apac:S7S_08935; -.
DR HOGENOM; CLU_117621_0_2_6; -.
DR OrthoDB; 9810590at2; -.
DR Proteomes; UP000006764; Chromosome.
DR GO; GO:0005829; C:cytosol; IEA:UniProt.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd04458; CSP_CDS; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR InterPro; IPR012156; Cold_shock_CspA.
DR InterPro; IPR011129; CSD.
DR InterPro; IPR019844; CSD_1.
DR InterPro; IPR002059; CSP_DNA-bd.
DR InterPro; IPR012751; CspD.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR NCBIfam; TIGR02381; cspD; 1.
DR PANTHER; PTHR46109; PROTEIN LIN-28; 1.
DR PANTHER; PTHR46109:SF1; PROTEIN LIN-28 HOMOLOG; 1.
DR Pfam; PF00313; CSD; 1.
DR PIRSF; PIRSF002599; Cold_shock_A; 1.
DR PRINTS; PR00050; COLDSHOCK.
DR SMART; SM00357; CSP; 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR PROSITE; PS00352; CSD_1; 1.
DR PROSITE; PS51857; CSD_2; 1.
PE 4: Predicted;
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000006764}.
FT DOMAIN 1..66
FT /note="CSD"
FT /evidence="ECO:0000259|PROSITE:PS51857"
SQ SEQUENCE 90 AA; 9806 MW; 66494B39D87F4E4A CRC64;
MATGKVKWFN NAKGYGFIRP DAGGEDLFVH YSYIQMDGYR SLKAGQPVEY ELQQANKGYH
AVNLRPADNG DADGGMVDAV ARAGTPVTEH
//
