GenomeNet

Database: UniProt
Entry: A0A0B8NZL8_9VIBR
LinkDB: A0A0B8NZL8_9VIBR
Original site: A0A0B8NZL8_9VIBR 
ID   A0A0B8NZL8_9VIBR        Unreviewed;       686 AA.
AC   A0A0B8NZL8;
DT   01-APR-2015, integrated into UniProtKB/TrEMBL.
DT   01-APR-2015, sequence version 1.
DT   24-JAN-2024, entry version 27.
DE   SubName: Full=Periplasmic alpha-amylase {ECO:0000313|EMBL:GAM56463.1};
DE            EC=3.2.1.1 {ECO:0000313|EMBL:GAM56463.1};
GN   ORFNames=JCM19231_290 {ECO:0000313|EMBL:GAM56463.1};
OS   Vibrio ishigakensis.
OC   Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC   Vibrio.
OX   NCBI_TaxID=1481914 {ECO:0000313|EMBL:GAM56463.1, ECO:0000313|Proteomes:UP000031671};
RN   [1] {ECO:0000313|EMBL:GAM56463.1, ECO:0000313|Proteomes:UP000031671}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=JCM 19231 {ECO:0000313|Proteomes:UP000031671};
RA   Sawabe T., Meirelles P., Feng G., Sayaka M., Hattori M., Ohkuma M.;
RT   "Vibrio sp. C1 JCM 19231 whole genome shotgun sequence.";
RL   Submitted (JAN-2015) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:GAM56463.1, ECO:0000313|Proteomes:UP000031671}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=JCM 19231 {ECO:0000313|Proteomes:UP000031671};
RG   NBRP consortium;
RA   Sawabe T., Meirelles P., Feng G., Sayaka M., Hattori M., Ohkuma M.;
RL   Submitted (JAN-2015) to the EMBL/GenBank/DDBJ databases.
CC   -!- COFACTOR:
CC       Name=Ca(2+); Xref=ChEBI:CHEBI:29108;
CC         Evidence={ECO:0000256|PIRSR:PIRSR036917-2};
CC       Note=Binds 1 Ca(2+) ion per subunit. {ECO:0000256|PIRSR:PIRSR036917-2};
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:GAM56463.1}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; BBRZ01000030; GAM56463.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A0B8NZL8; -.
DR   Proteomes; UP000031671; Unassembled WGS sequence.
DR   GO; GO:0042597; C:periplasmic space; IEA:InterPro.
DR   GO; GO:0004556; F:alpha-amylase activity; IEA:UniProtKB-EC.
DR   GO; GO:0005509; F:calcium ion binding; IEA:InterPro.
DR   GO; GO:0030980; P:alpha-glucan catabolic process; IEA:InterPro.
DR   GO; GO:0009313; P:oligosaccharide catabolic process; IEA:InterPro.
DR   Gene3D; 3.20.20.80; Glycosidases; 2.
DR   InterPro; IPR014635; A_amylase_MalS.
DR   InterPro; IPR006047; Glyco_hydro_13_cat_dom.
DR   InterPro; IPR017853; Glycoside_hydrolase_SF.
DR   PANTHER; PTHR10357; ALPHA-AMYLASE FAMILY MEMBER; 1.
DR   PANTHER; PTHR10357:SF209; PERIPLASMIC ALPHA-AMYLASE; 1.
DR   Pfam; PF00128; Alpha-amylase; 2.
DR   PIRSF; PIRSF036917; Alph_amls_MalS; 1.
DR   SMART; SM00642; Aamy; 1.
DR   SUPFAM; SSF51445; (Trans)glycosidases; 1.
PE   4: Predicted;
KW   Calcium {ECO:0000256|PIRSR:PIRSR036917-2};
KW   Disulfide bond {ECO:0000256|PIRSR:PIRSR036917-4};
KW   Glycosidase {ECO:0000313|EMBL:GAM56463.1};
KW   Hydrolase {ECO:0000313|EMBL:GAM56463.1};
KW   Metal-binding {ECO:0000256|PIRSR:PIRSR036917-2};
KW   Reference proteome {ECO:0000313|Proteomes:UP000031671};
KW   Signal {ECO:0000256|SAM:SignalP}.
FT   SIGNAL          1..21
FT                   /evidence="ECO:0000256|SAM:SignalP"
FT   CHAIN           22..686
FT                   /evidence="ECO:0000256|SAM:SignalP"
FT                   /id="PRO_5002139574"
FT   DOMAIN          206..648
FT                   /note="Glycosyl hydrolase family 13 catalytic"
FT                   /evidence="ECO:0000259|SMART:SM00642"
FT   ACT_SITE        466
FT                   /note="Nucleophile"
FT                   /evidence="ECO:0000256|PIRSR:PIRSR036917-1"
FT   ACT_SITE        506
FT                   /note="Proton donor"
FT                   /evidence="ECO:0000256|PIRSR:PIRSR036917-1"
FT   BINDING         327
FT                   /ligand="Ca(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29108"
FT                   /evidence="ECO:0000256|PIRSR:PIRSR036917-2"
FT   BINDING         470
FT                   /ligand="Ca(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29108"
FT                   /evidence="ECO:0000256|PIRSR:PIRSR036917-2"
FT   SITE            571
FT                   /note="Transition state stabilizer"
FT                   /evidence="ECO:0000256|PIRSR:PIRSR036917-3"
FT   DISULFID        132..540
FT                   /evidence="ECO:0000256|PIRSR:PIRSR036917-4"
SQ   SEQUENCE   686 AA;  76824 MW;  808719C57BFE4430 CRC64;
     MKLTQIGLLV AGICASGSLL AEPNITISTS TTSRDFPISA DQPLVVPLNK EQYIFKVTGI
     EGECSAPEEQ KVRFNRPLGI NCGADTELPF NIRFAGDYAI TYDDQAQTIS VKRQPKKAAK
     KEFVRPIPQV SCEVFTDKPV SIDVAGTFQD GTELVESFSG QTAEVKDGKV SLNPSRSNGG
     VMLLEKAGSE PSKEEALDWR NANIYFVMVD RFNNGDSSND QSYGRQKDGK EEIGTFHGGD
     LKGVIEKLDY IQSLGTDAIW LSPIVEQVHG FVGGGNKGSF PFYGYHGYWA RDFTKIDQNF
     GNDEDLKTLV TEAHKRGIKV MLDAVVNHPG YATVADIQHD KLNVLKGSAK GQDLTQWKPE
     PGKNWHSVND LVDYQNDNWS QWWGKDWVRT GLPGYDSPGS SDKTLTLAGL PDFKTESEKL
     VTPPQWLIDN PGTRVVAKEN YRVADYLVEW QTDWVKRFGI DAFRVDTVKH VEGEVWLDLK
     AKASERLAEW QKANNRKQEP FWMMGEVWGH SPYRSPYADE GFDALINFDM QKKLDKGAAC
     FSSMSDTYAN YSKEIQDNPG YTPVSYMSSH DTELFFSRFK SFEMQRDAAS ALLLSPGAIQ
     VYYGDEVARD IGPYADDFHQ GTRSDMVWKL DKDREALLDH WQTLGQFRQR HPSVGGGVHT
     DLAQEHGFAF SRTLDDDAVV VYFAGK
//
DBGET integrated database retrieval system