GenomeNet

Database: UniProt
Entry: A0A0C1JGN8_9RHOB
LinkDB: A0A0C1JGN8_9RHOB
Original site: A0A0C1JGN8_9RHOB 
ID   A0A0C1JGN8_9RHOB        Unreviewed;       300 AA.
AC   A0A0C1JGN8;
DT   01-APR-2015, integrated into UniProtKB/TrEMBL.
DT   01-APR-2015, sequence version 1.
DT   24-JAN-2024, entry version 38.
DE   SubName: Full=LysR family transcriptional regulator {ECO:0000313|EMBL:KIC46746.1};
GN   ORFNames=RA28_03025 {ECO:0000313|EMBL:KIC46746.1};
OS   Ruegeria sp. ANG-S4.
OC   Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales;
OC   Roseobacteraceae; Ruegeria.
OX   NCBI_TaxID=1577904 {ECO:0000313|EMBL:KIC46746.1, ECO:0000313|Proteomes:UP000031326};
RN   [1] {ECO:0000313|Proteomes:UP000031326}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ANG-S4 {ECO:0000313|Proteomes:UP000031326};
RX   PubMed=25755651; DOI=10.3389/fmicb.2015.00123;
RA   Collins A.J., Fullmer M.S., Gogarten J.P., Nyholm S.V.;
RT   "Comparative genomics of Roseobacter clade bacteria isolated from the
RT   accessory nidamental gland of Euprymna scolopes.";
RL   Front. Microbiol. 6:123-123(2015).
CC   -!- SIMILARITY: Belongs to the LysR transcriptional regulatory family.
CC       {ECO:0000256|ARBA:ARBA00009437}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:KIC46746.1}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; JWLK01000001; KIC46746.1; -; Genomic_DNA.
DR   RefSeq; WP_039523642.1; NZ_JWLK01000001.1.
DR   AlphaFoldDB; A0A0C1JGN8; -.
DR   OrthoDB; 9774011at2; -.
DR   Proteomes; UP000031326; Unassembled WGS sequence.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   CDD; cd08417; PBP2_Nitroaromatics_like; 1.
DR   Gene3D; 3.40.190.10; Periplasmic binding protein-like II; 2.
DR   Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR   InterPro; IPR005119; LysR_subst-bd.
DR   InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   InterPro; IPR036390; WH_DNA-bd_sf.
DR   InterPro; IPR037402; YidZ_PBP2.
DR   PANTHER; PTHR30118:SF6; HTH-TYPE TRANSCRIPTIONAL REGULATOR LEUO; 1.
DR   PANTHER; PTHR30118; HTH-TYPE TRANSCRIPTIONAL REGULATOR LEUO-RELATED; 1.
DR   Pfam; PF00126; HTH_1; 1.
DR   Pfam; PF03466; LysR_substrate; 1.
DR   PRINTS; PR00039; HTHLYSR.
DR   SUPFAM; SSF53850; Periplasmic binding protein-like II; 1.
DR   SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR   PROSITE; PS50931; HTH_LYSR; 1.
PE   3: Inferred from homology;
KW   Reference proteome {ECO:0000313|Proteomes:UP000031326}.
FT   DOMAIN          9..66
FT                   /note="HTH lysR-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50931"
SQ   SEQUENCE   300 AA;  33590 MW;  104B746762B66EB0 CRC64;
     MKKIDFTDLD GKVLRVFLMI LEESSVSKAA DRLGVTQSAI SHTLGKLRQV LGDPLFVRSG
     QGLTPTERAL SLKDPAQSVL DGMRALTEGR PFDPQSEQMD FQIATNDMPR ELIFPDLLRT
     TRDDAIRLRL EFIPSGVPDP ELLRNDRCQL MLTPLPPDGP DIFQKRLMTS PLMVFYDANR
     REPPNSWNSY CQSEHVDVRF ADGRSARSVM RGVDQSQIKP ATVTLPHFNA ISSFVKGSDM
     ISTDTALMKS GPLADLDCAP LPFECEPVVI YLVWHQRSAN DPAHKWLRTQ IEGIASTLQI
//
DBGET integrated database retrieval system