ID A0A0C9XEL6_9AGAR Unreviewed; 873 AA.
AC A0A0C9XEL6;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 32.
DE SubName: Full=Unplaced genomic scaffold K443scaffold_99, whole genome shotgun sequence {ECO:0000313|EMBL:KIK00004.1};
GN ORFNames=K443DRAFT_679485 {ECO:0000313|EMBL:KIK00004.1};
OS Laccaria amethystina LaAM-08-1.
OC Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes;
OC Agaricomycetidae; Agaricales; Agaricineae; Hydnangiaceae; Laccaria.
OX NCBI_TaxID=1095629 {ECO:0000313|EMBL:KIK00004.1, ECO:0000313|Proteomes:UP000054477};
RN [1] {ECO:0000313|EMBL:KIK00004.1, ECO:0000313|Proteomes:UP000054477}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=LaAM-08-1 {ECO:0000313|EMBL:KIK00004.1,
RC ECO:0000313|Proteomes:UP000054477};
RG DOE Joint Genome Institute;
RA Kuo A., Kohler A., Nagy L.G., Floudas D., Copeland A., Barry K.W.,
RA Cichocki N., Veneault-Fourrey C., LaButti K., Lindquist E.A., Lipzen A.,
RA Lundell T., Morin E., Murat C., Sun H., Tunlid A., Henrissat B.,
RA Grigoriev I.V., Hibbett D.S., Martin F., Nordberg H.P., Cantor M.N.,
RA Hua S.X.;
RL Submitted (APR-2014) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Proteomes:UP000054477}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=LaAM-08-1 {ECO:0000313|Proteomes:UP000054477};
RG DOE Joint Genome Institute;
RG Mycorrhizal Genomics Consortium;
RA Kohler A., Kuo A., Nagy L.G., Floudas D., Copeland A., Barry K.W.,
RA Cichocki N., Veneault-Fourrey C., LaButti K., Lindquist E.A., Lipzen A.,
RA Lundell T., Morin E., Murat C., Riley R., Ohm R., Sun H., Tunlid A.,
RA Henrissat B., Grigoriev I.V., Hibbett D.S., Martin F.;
RT "Evolutionary Origins and Diversification of the Mycorrhizal Mutualists.";
RL Submitted (JAN-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the WD repeat PWP2 family.
CC {ECO:0000256|ARBA:ARBA00010226}.
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DR EMBL; KN838634; KIK00004.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0C9XEL6; -.
DR STRING; 1095629.A0A0C9XEL6; -.
DR HOGENOM; CLU_010458_0_0_1; -.
DR OrthoDB; 23263at2759; -.
DR Proteomes; UP000054477; Unassembled WGS sequence.
DR GO; GO:0005730; C:nucleolus; IEA:UniProt.
DR GO; GO:0042254; P:ribosome biogenesis; IEA:UniProt.
DR CDD; cd00200; WD40; 1.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 3.
DR InterPro; IPR024977; Apc4-like_WD40_dom.
DR InterPro; IPR027145; PWP2.
DR InterPro; IPR011044; Quino_amine_DH_bsu.
DR InterPro; IPR007148; SSU_processome_Utp12.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR PANTHER; PTHR19858:SF0; PERIODIC TRYPTOPHAN PROTEIN 2 HOMOLOG-RELATED; 1.
DR PANTHER; PTHR19858; WD40 REPEAT PROTEIN; 1.
DR Pfam; PF12894; ANAPC4_WD40; 1.
DR Pfam; PF04003; Utp12; 1.
DR Pfam; PF00400; WD40; 5.
DR SMART; SM00320; WD40; 13.
DR SUPFAM; SSF50978; WD40 repeat-like; 2.
DR SUPFAM; SSF50969; YVTN repeat-like/Quinoprotein amine dehydrogenase; 1.
DR PROSITE; PS00678; WD_REPEATS_1; 1.
DR PROSITE; PS50082; WD_REPEATS_2; 5.
DR PROSITE; PS50294; WD_REPEATS_REGION; 5.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000054477};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW ProRule:PRU00221}.
FT DOMAIN 45..104
FT /note="Anaphase-promoting complex subunit 4-like WD40"
FT /evidence="ECO:0000259|Pfam:PF12894"
FT REPEAT 141..175
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 185..226
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 346..387
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 388..429
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 474..508
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT DOMAIN 755..858
FT /note="Small-subunit processome Utp12"
FT /evidence="ECO:0000259|Pfam:PF04003"
SQ SEQUENCE 873 AA; 96907 MW; 1A846097784C7F5C CRC64;
MKANYKFSNI CGTVYRQGNI IFTPDGNSLF SPVGNRVSVF DLVNNKSFTF AFENRKNISA
LALSPDGNVL VSVDEDGRAL LVNARRGIVL HHFNFHKAVK DIKFSPDGQY IAVTHGPHVQ
VWRTPNHLVR EFAPFNLHRT YTGHHDEVLS VEWSPDSKCF MTTSRDMTAR LFTLNPVAGF
RPKTFAGHRD AVLGAYFSSD GTTIYTVSRD GAVFTWKAKD DQMDEDSDDE GPIASTSNDT
AADTFNHIAN TRWGVHKRHY FNQTNTKVVC TTFHSASSLL VVGFSTGVFG LWEMPAFSNI
HTLSISQEKI SSVAINSSGE WLAFGARKLG QLLVWEWQSE SYILKQQGHY FDMNTLSYAP
DGQTIATGGD DGKVKVWSTY TGFCFVTFTE HSAPVSDVAF AKQGSVLFTA SLDGTVRAYD
LIRYRNFRTF TSPSPVQFSC LAVDPSGEVV AAGSTDSFEV FLWSVQTGKL LDILSGHEGP
ISSLVFSPSG NNQLASASWD RTVRVWNVFG RSRAVEPFTL TSDALALAFR PDGKELAVST
LDGQITFFDI QDSKQTNVID GRKDVSGGRK ADDRVTAANS TSGKAYNSLA YTADGRCVLA
GGNSKYVVLY DVREGEGVMV KKFQISQNLS LDGTEEFLDS RKVNEAGINT DLIDNREASD
LEDRLDLSLP GASRGAGDMS IRRYRQEART KCVRFSPTGR AWAAASTEGL LIYSLDETVT
FDPFDLSIDL TPQSVLKMLA AHEYLKALVM AFRLNEKPLI RRVYENVPRG DIRLVARQLP
VIYVPPLLRF VADHLDKSPH LEFDLIWVNT LLMAHGRLLR DRSGEHASVF RVLQKGLGEF
EHTLSKLCNE NTSMLLYVID QSKVNQEKDV EMS
//
