ID A0A0D1ZJ02_9EURO Unreviewed; 687 AA.
AC A0A0D1ZJ02;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 36.
DE RecName: Full=RRM domain-containing protein {ECO:0000259|PROSITE:PS50102};
GN ORFNames=PV08_08029 {ECO:0000313|EMBL:KIW12842.1};
OS Exophiala spinifera.
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes;
OC Chaetothyriomycetidae; Chaetothyriales; Herpotrichiellaceae; Exophiala.
OX NCBI_TaxID=91928 {ECO:0000313|EMBL:KIW12842.1, ECO:0000313|Proteomes:UP000053328};
RN [1] {ECO:0000313|EMBL:KIW12842.1, ECO:0000313|Proteomes:UP000053328}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CBS 89968 {ECO:0000313|EMBL:KIW12842.1,
RC ECO:0000313|Proteomes:UP000053328};
RG The Broad Institute Genomics Platform;
RA Cuomo C., de Hoog S., Gorbushina A., Stielow B., Teixiera M.,
RA Abouelleil A., Chapman S.B., Priest M., Young S.K., Wortman J., Nusbaum C.,
RA Birren B.;
RT "The Genome Sequence of Exophiala spinifera CBS89968.";
RL Submitted (JAN-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the RENT3 family.
CC {ECO:0000256|ARBA:ARBA00005991}.
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DR EMBL; KN847497; KIW12842.1; -; Genomic_DNA.
DR RefSeq; XP_016233058.1; XM_016382355.1.
DR AlphaFoldDB; A0A0D1ZJ02; -.
DR STRING; 91928.A0A0D1ZJ02; -.
DR GeneID; 27335112; -.
DR VEuPathDB; FungiDB:PV08_08029; -.
DR HOGENOM; CLU_018549_1_0_1; -.
DR OrthoDB; 77197at2759; -.
DR Proteomes; UP000053328; Unassembled WGS sequence.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IEA:InterPro.
DR CDD; cd12455; RRM_like_Smg4_UPF3; 1.
DR CDD; cd00590; RRM_SF; 1.
DR Gene3D; 3.30.70.330; -; 2.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR InterPro; IPR039722; Upf3.
DR InterPro; IPR005120; UPF3_dom.
DR PANTHER; PTHR13112:SF0; FI21285P1; 1.
DR PANTHER; PTHR13112; UPF3 REGULATOR OF NONSENSE TRANSCRIPTS-LIKE PROTEIN; 1.
DR Pfam; PF00076; RRM_1; 1.
DR Pfam; PF03467; Smg4_UPF3; 1.
DR SMART; SM00360; RRM; 1.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 2.
DR PROSITE; PS50102; RRM; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000053328};
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00176}.
FT DOMAIN 427..508
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT REGION 1..37
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 173..434
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 501..687
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 20..34
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 173..195
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 202..232
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 247..261
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 268..293
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 339..394
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 402..434
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 511..597
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 613..627
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 651..669
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 687 AA; 70695 MW; BD57D34AE3CA48B9 CRC64;
MSGQSKARSG GVLPVNAATR KNAAGQSNAK ASSRTPAPKL RLVIRRLPPG LTETEFWSVI
GDEWKAGSGK VDWAAFKDGK VSKDPAKPSR PARAYIKVKE QSLLELLSTQ IKGLTFQDAR
NTTKDPCLLG PPSLEFAPFN KVPSGRNRND ARQGTIDQDQ EFIDFLQSLT EPITKSGANG
TEPSDSKQDK VSTTPLVQYI KEKKANKAKE KEANQAKAAA KAREKQDVKP SKPETPRSTV
IIKGKAAPAE EKQRVQKATE DAVKAINKSM ASIQSKQQQN QGSPKSDGKQ STKETPPAPP
APAQASPAKR ERERSHASAA ARMLQRDLGL LPKDNKSQRA PKAATSPPNT EAESVTSPAK
RSASTSVQKP APPAEQKQTA QRTSTPTPAA PTGPRASRTP SAAAPKASST STPRPAKQAA
QPSANAKSAF LKHANPSQGI TEELLQAAFS EFGSIVKCEI DKKKGLGYID FSDTDGLKKA
MAASPVKVAN GQVVVLENKS PYAKRGQSAN DKGAANANAT KGAPTTNPNA NGLTRAGTPS
ATTPSKPGDS SKSSSAVAST STSTGKNASQ PQNHPTAADA SVSDQSASGA TPSTATPPTA
PRGAPRGGTG GNRGGRGNNS ASSGRGNARA GGQGGRQGNR SGRGGKKGSA AGANASSSTG
ETAQASPAAT TAAPAPAPTG PKGEAKK
//
