ID A0A0D2K411_9CHLO Unreviewed; 711 AA.
AC A0A0D2K411;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 29.
DE RecName: Full=NFACT RNA-binding domain-containing protein {ECO:0000259|Pfam:PF05670};
GN ORFNames=MNEG_2815 {ECO:0000313|EMBL:KIZ05143.1};
OS Monoraphidium neglectum.
OC Eukaryota; Viridiplantae; Chlorophyta; core chlorophytes; Chlorophyceae;
OC CS clade; Sphaeropleales; Selenastraceae; Monoraphidium.
OX NCBI_TaxID=145388 {ECO:0000313|EMBL:KIZ05143.1, ECO:0000313|Proteomes:UP000054498};
RN [1] {ECO:0000313|EMBL:KIZ05143.1, ECO:0000313|Proteomes:UP000054498}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SAG 48.87 {ECO:0000313|EMBL:KIZ05143.1,
RC ECO:0000313|Proteomes:UP000054498};
RX PubMed=24373495; DOI=10.1186/1471-2164-14-926;
RA Bogen C., Al-Dilaimi A., Albersmeier A., Wichmann J., Grundmann M.,
RA Rupp O., Lauersen K.J., Blifernez-Klassen O., Kalinowski J., Goesmann A.,
RA Mussgnug J.H., Kruse O.;
RT "Reconstruction of the lipid metabolism for the microalga Monoraphidium
RT neglectum from its genome sequence reveals characteristics suitable for
RT biofuel production.";
RL BMC Genomics 14:926-926(2013).
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DR EMBL; KK100551; KIZ05143.1; -; Genomic_DNA.
DR RefSeq; XP_013904162.1; XM_014048708.1.
DR AlphaFoldDB; A0A0D2K411; -.
DR GeneID; 25735693; -.
DR KEGG; mng:MNEG_2815; -.
DR OrthoDB; 297257at2759; -.
DR Proteomes; UP000054498; Unassembled WGS sequence.
DR GO; GO:0000049; F:tRNA binding; IEA:UniProtKB-KW.
DR GO; GO:0072344; P:rescue of stalled ribosome; IEA:InterPro.
DR Gene3D; 2.30.310.10; ibrinogen binding protein from staphylococcus aureus domain; 1.
DR HAMAP; MF_00844_B; RqcH_B; 1.
DR InterPro; IPR008532; NFACT_RNA-bd.
DR InterPro; IPR043682; RqcH_bacterial.
DR PANTHER; PTHR15239; NUCLEAR EXPORT MEDIATOR FACTOR NEMF; 1.
DR PANTHER; PTHR15239:SF6; RIBOSOME QUALITY CONTROL COMPLEX SUBUNIT NEMF; 1.
DR Pfam; PF05670; NFACT-R_1; 1.
DR Pfam; PF18297; NFACT-R_2; 1.
DR Pfam; PF05833; NFACT_N; 2.
PE 3: Inferred from homology;
KW Protein biosynthesis {ECO:0000256|ARBA:ARBA00022917};
KW Reference proteome {ECO:0000313|Proteomes:UP000054498};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884};
KW tRNA-binding {ECO:0000256|ARBA:ARBA00022555}.
FT DOMAIN 580..682
FT /note="NFACT RNA-binding"
FT /evidence="ECO:0000259|Pfam:PF05670"
FT REGION 19..58
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 251..288
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 552..579
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 711 AA; 75510 MW; 31AF99C1EFC0C69B CRC64;
MRNGDVECRW RLASLATAHQ QQQQHRGAAS ATTASSQQQE QQQQQERQRQ QSAPAVRSSK
QTLDYTALCA CVQELQAQWV PSKVEEVVQP DAYTLSLRLR TPLRQGWLHL SWHPTAARLS
AGAPPPRGAA SEAFSFAAAA SQQLKGLVLS GADIPQQWER VAQLQFGVRP GDPPSRMVYC
EIMANYSNVI LTDGAGVVVS AGHQVGGRMS SLRQVQQGRP YALPPAAGGV APGAAEPLEL
WRANVSRAAE LAAAPQQSSR EEGPQAAEEA QVRAQRKQKH GGGGGGGGRA TVLGGCVRAY
HGVSPSLAEE LCAAAGVQPR AHPSEVSDGE WGALHAAWRG WLERLESGSY AATLDEAGGR
FSVLGGYSKH FESVHELVEA YYSSLQASEL HASLHQKLTA AARGALKKAR SRVTAFQQQL
AAAEGVGAVQ RRADIIMANV YRIEEGATVL EAEDWDSGEA VSIPLDPEKT AVEQAEALYK
RARKLRRALD AVAPLLEAAL ADAEYLEQVE SEVAQLAVYE GPDDLAALRE VRDELVEAGA
IRAPPEAGLA AKAAAKGRKA TKKDKQRSGG AAGAAGGQGF RRFESPGGFA ILVGRNNKQN
DVLSHQVANP QDLWMHVRGM PGSHTLLRVE PGRGAPGEED VRAAAALAAW FSKARDSGKA
DVIVTRAEHV RKFKGAKPGQ VILAKEDRVV VVRPQDSSAA TAAVTTGGGG Q
//
