ID A0A0D2LRX1_GOSRA Unreviewed; 532 AA.
AC A0A0D2LRX1;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 28.
DE RecName: Full=Lycopene epsilon-cyclase {ECO:0008006|Google:ProtNLM};
GN ORFNames=B456_001G012900 {ECO:0000313|EMBL:KJB06802.1};
OS Gossypium raimondii (New World cotton).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=29730 {ECO:0000313|EMBL:KJB06802.1, ECO:0000313|Proteomes:UP000032304};
RN [1] {ECO:0000313|EMBL:KJB06802.1, ECO:0000313|Proteomes:UP000032304}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=23257886; DOI=10.1038/nature11798;
RA Paterson A.H., Wendel J.F., Gundlach H., Guo H., Jenkins J., Jin D.,
RA Llewellyn D., Showmaker K.C., Shu S., Udall J., Yoo M.J., Byers R.,
RA Chen W., Doron-Faigenboim A., Duke M.V., Gong L., Grimwood J., Grover C.,
RA Grupp K., Hu G., Lee T.H., Li J., Lin L., Liu T., Marler B.S., Page J.T.,
RA Roberts A.W., Romanel E., Sanders W.S., Szadkowski E., Tan X., Tang H.,
RA Xu C., Wang J., Wang Z., Zhang D., Zhang L., Ashrafi H., Bedon F.,
RA Bowers J.E., Brubaker C.L., Chee P.W., Das S., Gingle A.R., Haigler C.H.,
RA Harker D., Hoffmann L.V., Hovav R., Jones D.C., Lemke C., Mansoor S.,
RA ur Rahman M., Rainville L.N., Rambani A., Reddy U.K., Rong J.K.,
RA Saranga Y., Scheffler B.E., Scheffler J.A., Stelly D.M., Triplett B.A.,
RA Van Deynze A., Vaslin M.F., Waghmare V.N., Walford S.A., Wright R.J.,
RA Zaki E.A., Zhang T., Dennis E.S., Mayer K.F., Peterson D.G., Rokhsar D.S.,
RA Wang X., Schmutz J.;
RT "Repeated polyploidization of Gossypium genomes and the evolution of
RT spinnable cotton fibres.";
RL Nature 492:423-427(2012).
CC -!- PATHWAY: Carotenoid biosynthesis. {ECO:0000256|ARBA:ARBA00004829}.
CC -!- SIMILARITY: Belongs to the lycopene cyclase family.
CC {ECO:0000256|ARBA:ARBA00006599}.
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DR EMBL; CM001740; KJB06802.1; -; Genomic_DNA.
DR EMBL; CM001740; KJB06803.1; -; Genomic_DNA.
DR RefSeq; XP_012477534.1; XM_012622080.1.
DR AlphaFoldDB; A0A0D2LRX1; -.
DR STRING; 29730.A0A0D2LRX1; -.
DR EnsemblPlants; KJB06802; KJB06802; B456_001G012900.
DR EnsemblPlants; KJB06803; KJB06803; B456_001G012900.
DR GeneID; 105793131; -.
DR Gramene; KJB06802; KJB06802; B456_001G012900.
DR Gramene; KJB06803; KJB06803; B456_001G012900.
DR KEGG; gra:105793131; -.
DR eggNOG; ENOG502QT61; Eukaryota.
DR OMA; LTFERNN; -.
DR OrthoDB; 5485207at2759; -.
DR Proteomes; UP000032304; Chromosome 1.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0016860; F:intramolecular oxidoreductase activity; IEA:UniProt.
DR GO; GO:0016705; F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; IEA:InterPro.
DR GO; GO:0016117; P:carotenoid biosynthetic process; IEA:InterPro.
DR Gene3D; 3.50.50.60; FAD/NAD(P)-binding domain; 1.
DR InterPro; IPR036188; FAD/NAD-bd_sf.
DR InterPro; IPR010108; Lycopene_cyclase_b/e.
DR NCBIfam; TIGR01790; carotene-cycl; 1.
DR PANTHER; PTHR39757; -; 1.
DR PANTHER; PTHR39757:SF3; LYCOPENE EPSILON CYCLASE, CHLOROPLASTIC; 1.
DR Pfam; PF05834; Lycopene_cycl; 1.
DR PRINTS; PR00368; FADPNR.
DR PRINTS; PR00411; PNDRDTASEI.
DR SUPFAM; SSF51905; FAD/NAD(P)-binding domain; 1.
PE 3: Inferred from homology;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000032304};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 478..504
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
SQ SEQUENCE 532 AA; 59662 MW; 06AD213C718AB7C2 CRC64;
MMIATSVGAR KFAAVAVSKS ATWRSRRRKD PVSTKMAVSN NQRLISLEVS GSGAARESYV
AVNEDFADEE DYVKAGGSQL LFVQMQQHKE MDEQSKLADK LPPISIGDNI LDLVVIGSGP
AGLALAAESA KLGLNVGLIS PDLPFTNNYG LWEDEIKDLG LEKCMEHVWP NTIVYLDDDK
PITIGRAYGR VDRRLLHEEL LKRCVESGVM YLSSKVESIV EATDGHNLVA CEYEHVVPCR
LVVVASGAAS GKLLQYEVGG PRVVMQSAYG IEVEVENNPY DPSMMVFMDY RDYAKEQVPC
LGDQYPSFLY GMPMSSTRVF FEETCLALKE AMPMDFLKKK LMSRLLAMGI RIVKVYEEEW
SYVPLGGSLP NMKQKNLAFG AAASMVHPAT GYSIARSLSE APRYASVIAK ILKRDYSKGF
LTFERNNWNM SIEAWNTLWP QERKRQRSFF LFGLALLLQL DTEGSRTFFR IFFRLPSWMW
QGFLGSTLSS IDLVVFAFSM FVIAPMDMKM LLIRHLLKDP TATTMISTYL TI
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