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Database: UniProt
Entry: A0A0D2MT63_GOSRA
LinkDB: A0A0D2MT63_GOSRA
Original site: A0A0D2MT63_GOSRA 
ID   A0A0D2MT63_GOSRA        Unreviewed;       693 AA.
AC   A0A0D2MT63;
DT   29-APR-2015, integrated into UniProtKB/TrEMBL.
DT   29-APR-2015, sequence version 1.
DT   24-JAN-2024, entry version 36.
DE   RecName: Full=RRM domain-containing protein {ECO:0000259|PROSITE:PS50102};
GN   ORFNames=B456_004G036800 {ECO:0000313|EMBL:KJB22242.1};
OS   Gossypium raimondii (New World cotton).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX   NCBI_TaxID=29730 {ECO:0000313|EMBL:KJB22242.1, ECO:0000313|Proteomes:UP000032304};
RN   [1] {ECO:0000313|EMBL:KJB22242.1, ECO:0000313|Proteomes:UP000032304}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=23257886; DOI=10.1038/nature11798;
RA   Paterson A.H., Wendel J.F., Gundlach H., Guo H., Jenkins J., Jin D.,
RA   Llewellyn D., Showmaker K.C., Shu S., Udall J., Yoo M.J., Byers R.,
RA   Chen W., Doron-Faigenboim A., Duke M.V., Gong L., Grimwood J., Grover C.,
RA   Grupp K., Hu G., Lee T.H., Li J., Lin L., Liu T., Marler B.S., Page J.T.,
RA   Roberts A.W., Romanel E., Sanders W.S., Szadkowski E., Tan X., Tang H.,
RA   Xu C., Wang J., Wang Z., Zhang D., Zhang L., Ashrafi H., Bedon F.,
RA   Bowers J.E., Brubaker C.L., Chee P.W., Das S., Gingle A.R., Haigler C.H.,
RA   Harker D., Hoffmann L.V., Hovav R., Jones D.C., Lemke C., Mansoor S.,
RA   ur Rahman M., Rainville L.N., Rambani A., Reddy U.K., Rong J.K.,
RA   Saranga Y., Scheffler B.E., Scheffler J.A., Stelly D.M., Triplett B.A.,
RA   Van Deynze A., Vaslin M.F., Waghmare V.N., Walford S.A., Wright R.J.,
RA   Zaki E.A., Zhang T., Dennis E.S., Mayer K.F., Peterson D.G., Rokhsar D.S.,
RA   Wang X., Schmutz J.;
RT   "Repeated polyploidization of Gossypium genomes and the evolution of
RT   spinnable cotton fibres.";
RL   Nature 492:423-427(2012).
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DR   EMBL; CM001743; KJB22240.1; -; Genomic_DNA.
DR   EMBL; CM001743; KJB22242.1; -; Genomic_DNA.
DR   RefSeq; XP_012473252.1; XM_012617798.1.
DR   AlphaFoldDB; A0A0D2MT63; -.
DR   STRING; 29730.A0A0D2MT63; -.
DR   EnsemblPlants; KJB22240; KJB22240; B456_004G036800.
DR   EnsemblPlants; KJB22242; KJB22242; B456_004G036800.
DR   GeneID; 105790286; -.
DR   Gramene; KJB22240; KJB22240; B456_004G036800.
DR   Gramene; KJB22242; KJB22242; B456_004G036800.
DR   KEGG; gra:105790286; -.
DR   eggNOG; KOG3702; Eukaryota.
DR   OMA; IKRTSHQ; -.
DR   OrthoDB; 1123096at2759; -.
DR   Proteomes; UP000032304; Chromosome 4.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0008143; F:poly(A) binding; IEA:InterPro.
DR   GO; GO:0006397; P:mRNA processing; IEA:InterPro.
DR   GO; GO:1900364; P:negative regulation of mRNA polyadenylation; IEA:InterPro.
DR   GO; GO:0043488; P:regulation of mRNA stability; IEA:InterPro.
DR   Gene3D; 3.30.70.330; -; 1.
DR   Gene3D; 1.20.1390.10; PWI domain; 1.
DR   InterPro; IPR040366; Nab2/ZC3H14.
DR   InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR   InterPro; IPR002483; PWI_dom.
DR   InterPro; IPR035979; RBD_domain_sf.
DR   InterPro; IPR000504; RRM_dom.
DR   PANTHER; PTHR14738:SF32; RNA BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN; 1.
DR   PANTHER; PTHR14738; ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 14; 1.
DR   Pfam; PF01480; PWI; 1.
DR   Pfam; PF00076; RRM_1; 1.
DR   SMART; SM00360; RRM; 1.
DR   SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR   PROSITE; PS50102; RRM; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000032304};
KW   RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00176}.
FT   DOMAIN          521..598
FT                   /note="RRM"
FT                   /evidence="ECO:0000259|PROSITE:PS50102"
FT   REGION          111..207
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          220..250
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          442..464
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        121..148
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        161..175
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        187..206
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        236..250
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        447..463
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   693 AA;  76341 MW;  07A3BBEBFCDEF3D2 CRC64;
     MKMGSVDRVN DLTFKVNFSG DGAAKLKDRV KEKLKEFMGD YTDDTLVEYV IVLLRNGRRK
     GEAMNELNVF LGDDSESFVS WLWDHLASNL DLYAPSREPH LDEGTRTTVL GNQSIGAESH
     QLDTDSERGK STKFPRNRHN RDWKGLVRDA AEPPPLRSSE VENIRFEEKS SRKVSRGRST
     SPQPTQKKRS RPDERQPIKR EAVPNIDAPR RLLQFAVRDA VGTSRAPISA KEPSSKRLRS
     VVSTSSGDLP ARPRRIQSVA RVPNPMATVI KAVAEAAEDV TKVKNAGSVF DRLGPGMDVL
     ETGDLHPEFR ESLTEDEEYG DLNQPLEKTH SAYYQREECA GRHVGNVTAL ESQTGLASES
     LSDNEWYGDV DVVGHGVMDE SHTGHAGRSS GNKGDNSLMV QYNVAKDDEI LQTRNKDQNQ
     STIATNTSRK IVNISVNVNT WKPPHYQEPR EASELDSRKP LPESEAVANK ANHRLMENGN
     PVNVGNGNVK GAAYNQELSQ KAVQPSASYA AARPLEDADS RTIFVSNVHF AATKDSLSRH
     FNKFGDVLKV IIVTDAATGQ PKGSAYVEFM RKEAADNALS LDGTSFMSRI LKVVKKSSAP
     QEAAAPVMTW PRVARGSPFV AARFGRASFA RGMPGAFRPH LPVKPGARSF QWKRDAQTTT
     TRTDAVTGTT VSSPTFRSLT YVRTEPKSAG NTS
//
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