ID A0A0D2MT63_GOSRA Unreviewed; 693 AA.
AC A0A0D2MT63;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 24-JAN-2024, entry version 36.
DE RecName: Full=RRM domain-containing protein {ECO:0000259|PROSITE:PS50102};
GN ORFNames=B456_004G036800 {ECO:0000313|EMBL:KJB22242.1};
OS Gossypium raimondii (New World cotton).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=29730 {ECO:0000313|EMBL:KJB22242.1, ECO:0000313|Proteomes:UP000032304};
RN [1] {ECO:0000313|EMBL:KJB22242.1, ECO:0000313|Proteomes:UP000032304}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=23257886; DOI=10.1038/nature11798;
RA Paterson A.H., Wendel J.F., Gundlach H., Guo H., Jenkins J., Jin D.,
RA Llewellyn D., Showmaker K.C., Shu S., Udall J., Yoo M.J., Byers R.,
RA Chen W., Doron-Faigenboim A., Duke M.V., Gong L., Grimwood J., Grover C.,
RA Grupp K., Hu G., Lee T.H., Li J., Lin L., Liu T., Marler B.S., Page J.T.,
RA Roberts A.W., Romanel E., Sanders W.S., Szadkowski E., Tan X., Tang H.,
RA Xu C., Wang J., Wang Z., Zhang D., Zhang L., Ashrafi H., Bedon F.,
RA Bowers J.E., Brubaker C.L., Chee P.W., Das S., Gingle A.R., Haigler C.H.,
RA Harker D., Hoffmann L.V., Hovav R., Jones D.C., Lemke C., Mansoor S.,
RA ur Rahman M., Rainville L.N., Rambani A., Reddy U.K., Rong J.K.,
RA Saranga Y., Scheffler B.E., Scheffler J.A., Stelly D.M., Triplett B.A.,
RA Van Deynze A., Vaslin M.F., Waghmare V.N., Walford S.A., Wright R.J.,
RA Zaki E.A., Zhang T., Dennis E.S., Mayer K.F., Peterson D.G., Rokhsar D.S.,
RA Wang X., Schmutz J.;
RT "Repeated polyploidization of Gossypium genomes and the evolution of
RT spinnable cotton fibres.";
RL Nature 492:423-427(2012).
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; CM001743; KJB22240.1; -; Genomic_DNA.
DR EMBL; CM001743; KJB22242.1; -; Genomic_DNA.
DR RefSeq; XP_012473252.1; XM_012617798.1.
DR AlphaFoldDB; A0A0D2MT63; -.
DR STRING; 29730.A0A0D2MT63; -.
DR EnsemblPlants; KJB22240; KJB22240; B456_004G036800.
DR EnsemblPlants; KJB22242; KJB22242; B456_004G036800.
DR GeneID; 105790286; -.
DR Gramene; KJB22240; KJB22240; B456_004G036800.
DR Gramene; KJB22242; KJB22242; B456_004G036800.
DR KEGG; gra:105790286; -.
DR eggNOG; KOG3702; Eukaryota.
DR OMA; IKRTSHQ; -.
DR OrthoDB; 1123096at2759; -.
DR Proteomes; UP000032304; Chromosome 4.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0008143; F:poly(A) binding; IEA:InterPro.
DR GO; GO:0006397; P:mRNA processing; IEA:InterPro.
DR GO; GO:1900364; P:negative regulation of mRNA polyadenylation; IEA:InterPro.
DR GO; GO:0043488; P:regulation of mRNA stability; IEA:InterPro.
DR Gene3D; 3.30.70.330; -; 1.
DR Gene3D; 1.20.1390.10; PWI domain; 1.
DR InterPro; IPR040366; Nab2/ZC3H14.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR002483; PWI_dom.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR PANTHER; PTHR14738:SF32; RNA BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN; 1.
DR PANTHER; PTHR14738; ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 14; 1.
DR Pfam; PF01480; PWI; 1.
DR Pfam; PF00076; RRM_1; 1.
DR SMART; SM00360; RRM; 1.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR PROSITE; PS50102; RRM; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000032304};
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00176}.
FT DOMAIN 521..598
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT REGION 111..207
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 220..250
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 442..464
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 121..148
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 161..175
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 187..206
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 236..250
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 447..463
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 693 AA; 76341 MW; 07A3BBEBFCDEF3D2 CRC64;
MKMGSVDRVN DLTFKVNFSG DGAAKLKDRV KEKLKEFMGD YTDDTLVEYV IVLLRNGRRK
GEAMNELNVF LGDDSESFVS WLWDHLASNL DLYAPSREPH LDEGTRTTVL GNQSIGAESH
QLDTDSERGK STKFPRNRHN RDWKGLVRDA AEPPPLRSSE VENIRFEEKS SRKVSRGRST
SPQPTQKKRS RPDERQPIKR EAVPNIDAPR RLLQFAVRDA VGTSRAPISA KEPSSKRLRS
VVSTSSGDLP ARPRRIQSVA RVPNPMATVI KAVAEAAEDV TKVKNAGSVF DRLGPGMDVL
ETGDLHPEFR ESLTEDEEYG DLNQPLEKTH SAYYQREECA GRHVGNVTAL ESQTGLASES
LSDNEWYGDV DVVGHGVMDE SHTGHAGRSS GNKGDNSLMV QYNVAKDDEI LQTRNKDQNQ
STIATNTSRK IVNISVNVNT WKPPHYQEPR EASELDSRKP LPESEAVANK ANHRLMENGN
PVNVGNGNVK GAAYNQELSQ KAVQPSASYA AARPLEDADS RTIFVSNVHF AATKDSLSRH
FNKFGDVLKV IIVTDAATGQ PKGSAYVEFM RKEAADNALS LDGTSFMSRI LKVVKKSSAP
QEAAAPVMTW PRVARGSPFV AARFGRASFA RGMPGAFRPH LPVKPGARSF QWKRDAQTTT
TRTDAVTGTT VSSPTFRSLT YVRTEPKSAG NTS
//