UniProt: A0A0D2PB60

Database: UniProt
Entry: A0A0D2PB60_GOSRA

LinkDB:  A0A0D2PB60_GOSRA 
Original site:  A0A0D2PB60_GOSRA

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Ontology (4)   
   GO (4)   
Gene (2)   
   KEGG GENES (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   EMBL (2)   
Protein domain (5)   
   InterPro (3)   
   Pfam (2)   
Literature (2)   
   PubMed (2)   
All databases (16)   

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ID   A0A0D2PB60_GOSRA        Unreviewed;       609 AA.
AC   A0A0D2PB60;
DT   29-APR-2015, integrated into UniProtKB/TrEMBL.
DT   29-APR-2015, sequence version 1.
DT   27-MAR-2024, entry version 28.
DE   RecName: Full=Starch synthase, chloroplastic/amyloplastic {ECO:0000256|RuleBase:RU361232};
DE            EC=2.4.1.- {ECO:0000256|RuleBase:RU361232};
GN   ORFNames=B456_004G128700 {ECO:0000313|EMBL:KJB24118.1}, Gorai_014656
GN   {ECO:0000313|EMBL:MBA0583812.1};
OS   Gossypium raimondii (New World cotton).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX   NCBI_TaxID=29730 {ECO:0000313|EMBL:KJB24118.1, ECO:0000313|Proteomes:UP000032304};
RN   [1] {ECO:0000313|EMBL:KJB24118.1, ECO:0000313|Proteomes:UP000032304}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=23257886; DOI=10.1038/nature11798;
RA   Paterson A.H., Wendel J.F., Gundlach H., Guo H., Jenkins J., Jin D.,
RA   Llewellyn D., Showmaker K.C., Shu S., Udall J., Yoo M.J., Byers R.,
RA   Chen W., Doron-Faigenboim A., Duke M.V., Gong L., Grimwood J., Grover C.,
RA   Grupp K., Hu G., Lee T.H., Li J., Lin L., Liu T., Marler B.S., Page J.T.,
RA   Roberts A.W., Romanel E., Sanders W.S., Szadkowski E., Tan X., Tang H.,
RA   Xu C., Wang J., Wang Z., Zhang D., Zhang L., Ashrafi H., Bedon F.,
RA   Bowers J.E., Brubaker C.L., Chee P.W., Das S., Gingle A.R., Haigler C.H.,
RA   Harker D., Hoffmann L.V., Hovav R., Jones D.C., Lemke C., Mansoor S.,
RA   ur Rahman M., Rainville L.N., Rambani A., Reddy U.K., Rong J.K.,
RA   Saranga Y., Scheffler B.E., Scheffler J.A., Stelly D.M., Triplett B.A.,
RA   Van Deynze A., Vaslin M.F., Waghmare V.N., Walford S.A., Wright R.J.,
RA   Zaki E.A., Zhang T., Dennis E.S., Mayer K.F., Peterson D.G., Rokhsar D.S.,
RA   Wang X., Schmutz J.;
RT   "Repeated polyploidization of Gossypium genomes and the evolution of
RT   spinnable cotton fibres.";
RL   Nature 492:423-427(2012).
RN   [2] {ECO:0000313|EMBL:MBA0583812.1, ECO:0000313|Proteomes:UP000593578}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=8 {ECO:0000313|EMBL:MBA0583812.1};
RC   TISSUE=Leaf {ECO:0000313|EMBL:MBA0583812.1};
RX   PubMed=30476109;
RA   Grover C.E., Arick M.A. 2nd, Thrash A., Conover J.L., Sanders W.S.,
RA   Peterson D.G., Frelichowski J.E., Scheffler J.A., Scheffler B.E.,
RA   Wendel J.F.;
RT   "Insights into the Evolution of the New World Diploid Cottons (Gossypium,
RT   Subgenus Houzingenia) Based on Genome Sequencing.";
RL   Genome Biol. Evol. 11:53-71(2019).
RN   [3] {ECO:0000313|EMBL:MBA0583812.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=8 {ECO:0000313|EMBL:MBA0583812.1};
RC   TISSUE=Leaf {ECO:0000313|EMBL:MBA0583812.1};
RA   Grover C.E., Arick M.A. II, Thrash A., Conover J.L., Sanders W.S.,
RA   Peterson D.G., Scheffler J.A., Scheffler B.E., Wendel J.F.;
RL   Submitted (APR-2020) to the EMBL/GenBank/DDBJ databases.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=[(1->4)-alpha-D-glucosyl](n) + an NDP-alpha-D-glucose =
CC         [(1->4)-alpha-D-glucosyl](n+1) + a ribonucleoside 5'-diphosphate +
CC         H(+); Xref=Rhea:RHEA:15873, Rhea:RHEA-COMP:9584, Rhea:RHEA-COMP:9587,
CC         ChEBI:CHEBI:15378, ChEBI:CHEBI:15444, ChEBI:CHEBI:57930,
CC         ChEBI:CHEBI:76533; EC=2.4.1.242;
CC         Evidence={ECO:0000256|ARBA:ARBA00036544};
CC   -!- PATHWAY: Glycan biosynthesis; starch biosynthesis.
CC       {ECO:0000256|ARBA:ARBA00004727, ECO:0000256|RuleBase:RU361232}.
CC   -!- SUBCELLULAR LOCATION: Plastid, chloroplast
CC       {ECO:0000256|RuleBase:RU361232}. Plastid, amyloplast
CC       {ECO:0000256|RuleBase:RU361232}.
CC   -!- SIMILARITY: Belongs to the glycosyltransferase 1 family.
CC       Bacterial/plant glycogen synthase subfamily.
CC       {ECO:0000256|ARBA:ARBA00010281, ECO:0000256|RuleBase:RU361232}.
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DR   EMBL; CM001743; KJB24108.1; -; Genomic_DNA.
DR   EMBL; CM001743; KJB24118.1; -; Genomic_DNA.
DR   EMBL; JABEZZ010000004; MBA0583812.1; -; Genomic_DNA.
DR   RefSeq; XP_012474755.1; XM_012619301.1.
DR   AlphaFoldDB; A0A0D2PB60; -.
DR   STRING; 29730.A0A0D2PB60; -.
DR   EnsemblPlants; KJB24108; KJB24108; B456_004G128700.
DR   EnsemblPlants; KJB24118; KJB24118; B456_004G128700.
DR   GeneID; 105791291; -.
DR   Gramene; KJB24108; KJB24108; B456_004G128700.
DR   Gramene; KJB24118; KJB24118; B456_004G128700.
DR   KEGG; gra:105791291; -.
DR   eggNOG; ENOG502QQX3; Eukaryota.
DR   OrthoDB; 141134at2759; -.
DR   UniPathway; UPA00152; -.
DR   Proteomes; UP000032304; Chromosome 4.
DR   Proteomes; UP000593578; Unassembled WGS sequence.
DR   GO; GO:0009501; C:amyloplast; IEA:UniProtKB-SubCell.
DR   GO; GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
DR   GO; GO:0004373; F:glycogen (starch) synthase activity; IEA:InterPro.
DR   GO; GO:0019252; P:starch biosynthetic process; IEA:UniProtKB-UniRule.
DR   CDD; cd03791; GT5_Glycogen_synthase_DULL1-like; 1.
DR   Gene3D; 3.40.50.2000; Glycogen Phosphorylase B; 2.
DR   HAMAP; MF_00484; Glycogen_synth; 1.
DR   InterPro; IPR001296; Glyco_trans_1.
DR   InterPro; IPR011835; GS/SS.
DR   InterPro; IPR013534; Starch_synth_cat_dom.
DR   NCBIfam; TIGR02095; glgA; 1.
DR   PANTHER; PTHR45825; GRANULE-BOUND STARCH SYNTHASE 1, CHLOROPLASTIC/AMYLOPLASTIC; 1.
DR   PANTHER; PTHR45825:SF3; GRANULE-BOUND STARCH SYNTHASE 1, CHLOROPLASTIC_AMYLOPLASTIC; 1.
DR   Pfam; PF08323; Glyco_transf_5; 1.
DR   Pfam; PF00534; Glycos_transf_1; 1.
DR   SUPFAM; SSF53756; UDP-Glycosyltransferase/glycogen phosphorylase; 1.
PE   3: Inferred from homology;
KW   Amyloplast {ECO:0000256|RuleBase:RU361232};
KW   Chloroplast {ECO:0000256|RuleBase:RU361232};
KW   Glycosyltransferase {ECO:0000256|ARBA:ARBA00022676,
KW   ECO:0000256|RuleBase:RU361232}; Plastid {ECO:0000256|RuleBase:RU361232};
KW   Reference proteome {ECO:0000313|Proteomes:UP000032304};
KW   Starch biosynthesis {ECO:0000256|ARBA:ARBA00022922,
KW   ECO:0000256|RuleBase:RU361232};
KW   Transferase {ECO:0000256|ARBA:ARBA00022679}.
FT   DOMAIN          84..345
FT                   /note="Starch synthase catalytic"
FT                   /evidence="ECO:0000259|Pfam:PF08323"
FT   DOMAIN          398..521
FT                   /note="Glycosyl transferase family 1"
FT                   /evidence="ECO:0000259|Pfam:PF00534"
FT   REGION          1..21
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   609 AA;  66988 MW;  15695017B8479B1A CRC64;
     MATLTTSHFV STSSHFSSHG ADTKANLAQV GARNQAMTHN GLRSLNKVDR LQIRTTNAKA
     VVTKAMKQAD HRPLGKIICG IGMNIVFVSA ECGPWSKTGG LGDVLGGLPP AMAAKGHRVM
     TVCPRYDQYK DAWDTSVLVD LKVGDKVVTV RFFHCYKRGV DRVFVDHPMF LEKVWGKTAS
     KIYGPRAGLD YEDNQLRFSL LCQAALEAPR VLNLNSSKNF SGPYGEDVVF IANDWHSALL
     PCYLKSMYQS RGIYMNAKVV FCIHNIAYQG RFAFADFKRL NLPERFKSSF DFIDGYNKPV
     KGRKINWMKA GILESHRVLT VSPYYAQELV SGEDKGVELD NIIRKTGITG IVNGMDVQEW
     NPASDKYISV KYDATTVMKA KPLLKEALQA EVGLPCDGDV PLIGFIGRLE EQKGSDILAE
     AIPKLVAENC QIVVLGTGKK AMEKQIEQLE IQYPDNVRAV AKFNVSLAHM IIAGADYILV
     PSRFEPCGLI QLHAMRYGTV PIVASTGGLV DTVKEGFTGF QMGAFNVECD EVDPSDVIKV
     VKTVKRALAT YGTQALKEMI QNCMAQDFSW KGPSRLWEKM LLSLGVAGSE PGIEGEEVAP
     LAKENVATP
//

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