ID A0A0D2PEH9_GOSRA Unreviewed; 853 AA.
AC A0A0D2PEH9;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 33.
DE RecName: Full=G-patch domain-containing protein {ECO:0000259|PROSITE:PS50174};
GN ORFNames=B456_007G247300 {ECO:0000313|EMBL:KJB44347.1};
OS Gossypium raimondii (New World cotton).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=29730 {ECO:0000313|EMBL:KJB44347.1, ECO:0000313|Proteomes:UP000032304};
RN [1] {ECO:0000313|EMBL:KJB44347.1, ECO:0000313|Proteomes:UP000032304}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=23257886; DOI=10.1038/nature11798;
RA Paterson A.H., Wendel J.F., Gundlach H., Guo H., Jenkins J., Jin D.,
RA Llewellyn D., Showmaker K.C., Shu S., Udall J., Yoo M.J., Byers R.,
RA Chen W., Doron-Faigenboim A., Duke M.V., Gong L., Grimwood J., Grover C.,
RA Grupp K., Hu G., Lee T.H., Li J., Lin L., Liu T., Marler B.S., Page J.T.,
RA Roberts A.W., Romanel E., Sanders W.S., Szadkowski E., Tan X., Tang H.,
RA Xu C., Wang J., Wang Z., Zhang D., Zhang L., Ashrafi H., Bedon F.,
RA Bowers J.E., Brubaker C.L., Chee P.W., Das S., Gingle A.R., Haigler C.H.,
RA Harker D., Hoffmann L.V., Hovav R., Jones D.C., Lemke C., Mansoor S.,
RA ur Rahman M., Rainville L.N., Rambani A., Reddy U.K., Rong J.K.,
RA Saranga Y., Scheffler B.E., Scheffler J.A., Stelly D.M., Triplett B.A.,
RA Van Deynze A., Vaslin M.F., Waghmare V.N., Walford S.A., Wright R.J.,
RA Zaki E.A., Zhang T., Dennis E.S., Mayer K.F., Peterson D.G., Rokhsar D.S.,
RA Wang X., Schmutz J.;
RT "Repeated polyploidization of Gossypium genomes and the evolution of
RT spinnable cotton fibres.";
RL Nature 492:423-427(2012).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC ECO:0000256|PIRNR:PIRNR017706}.
CC -!- SIMILARITY: Belongs to the TFP11/STIP family.
CC {ECO:0000256|ARBA:ARBA00010900, ECO:0000256|PIRNR:PIRNR017706}.
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DR EMBL; CM001746; KJB44347.1; -; Genomic_DNA.
DR RefSeq; XP_012492330.1; XM_012636876.1.
DR AlphaFoldDB; A0A0D2PEH9; -.
DR STRING; 29730.A0A0D2PEH9; -.
DR EnsemblPlants; KJB44347; KJB44347; B456_007G247300.
DR GeneID; 105804314; -.
DR Gramene; KJB44347; KJB44347; B456_007G247300.
DR KEGG; gra:105804314; -.
DR eggNOG; KOG2184; Eukaryota.
DR OMA; QNEFNPH; -.
DR OrthoDB; 3060898at2759; -.
DR Proteomes; UP000032304; Chromosome 7.
DR GO; GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0000390; P:spliceosomal complex disassembly; IEA:InterPro.
DR InterPro; IPR000467; G_patch_dom.
DR InterPro; IPR022783; GCFC_dom.
DR InterPro; IPR022159; STIP/TFIP11_N.
DR InterPro; IPR024933; TFP11.
DR InterPro; IPR045211; TFP11/STIP/Ntr1.
DR PANTHER; PTHR23329:SF1; TUFTELIN-INTERACTING PROTEIN 11; 1.
DR PANTHER; PTHR23329; TUFTELIN-INTERACTING PROTEIN 11-RELATED; 1.
DR Pfam; PF01585; G-patch; 1.
DR Pfam; PF07842; GCFC; 1.
DR Pfam; PF12457; TIP_N; 1.
DR PIRSF; PIRSF017706; TFIP11; 1.
DR SMART; SM00443; G_patch; 1.
DR PROSITE; PS50174; G_PATCH; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW mRNA processing {ECO:0000256|ARBA:ARBA00022664,
KW ECO:0000256|PIRNR:PIRNR017706};
KW mRNA splicing {ECO:0000256|ARBA:ARBA00023187,
KW ECO:0000256|PIRNR:PIRNR017706};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|PIRNR:PIRNR017706};
KW Reference proteome {ECO:0000313|Proteomes:UP000032304};
KW Spliceosome {ECO:0000256|ARBA:ARBA00022728, ECO:0000256|PIRNR:PIRNR017706}.
FT DOMAIN 197..242
FT /note="G-patch"
FT /evidence="ECO:0000259|PROSITE:PS50174"
FT REGION 32..194
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 346..394
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 56..73
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 78..109
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 156..180
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 853 AA; 97163 MW; 15F22C03EBF78BC6 CRC64;
MDEYQEMERF GMENDFEDAQ WIDGEFYYKK RKEKRTQTKD DVIYGVFASD TDSEDGGSSS
SRKRRKEFGK KADLTKPVNF VSTGTVMPTQ EIDNNSKVEN DNSVPDDNGN DSRPGLGSGV
GLGFGGNDSL PKSDGNIVAD EDGDTSFLPT AFGRKIKEGA QRREKERERL KMEKKSLGGR
REAGGGNGDV GSFEKHTKGI GMKLLEKMGY KGGGLGKNEQ GIVAPIEAKM RPKNMGMGFN
DFKEAKLPGL QQLEEKKSVS QQPVGKAKER LWSKNAKGRK KEEYITVEEL LAKKQEEGVE
IVQKVIDMRG PQVRVLTNLE NLDAEEKARE NDVPMPELQH NLKLIVDLAE LDIQKIDRDL
RNEKETALSL QKEKEKLEIE ASHQKQHLAN MEQIVSVLGQ IEEENSSGKL TLESLANSFR
DLQKNYADDY KLCNLSCIAC SLALPLFIRM FQGWDPLVNP SYRMEVISAW KDLLQIDGSY
DIWEDAATPY CQLISEVVLP AVRISGINTW EPRNPEPMLG FLESWEKLLP SPILQIILDT
VVMPKLSRAV DSWNPRKETV PIHVWVHPWL PMLGPKLEGL YQTIRMKLSN VLDAWHPSDP
SAYAILSPWK TVFDSVSWEQ LMRQYIVPKL QIALQEFQIN PADQKLDQFY WVMSWASAIP
IHLMVDLMEK FFFVKWLQVL YHWLCSKPDF EEIKNWYMGW KGLLPQELLA NESIRNQLNC
GLEMMVQAAD HVPVVQPGLR ENVTYLKVRE QRQFEAQQRA AAHAQQPAAA QMDGVPEMSL
KEVVEAYAQQ HELLFKPKPG RMHNGQQIYG FGNISVIVDS LNQKIFAQKD NGWSLVSLDD
LLKMHYNSLA RRR
//
