ID A0A0D2Q3I4_GOSRA Unreviewed; 579 AA.
AC A0A0D2Q3I4;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 39.
DE RecName: Full=RanBP2-type domain-containing protein {ECO:0000259|PROSITE:PS01358};
GN ORFNames=B456_008G285500 {ECO:0000313|EMBL:KJB52932.1};
OS Gossypium raimondii (New World cotton).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=29730 {ECO:0000313|EMBL:KJB52932.1, ECO:0000313|Proteomes:UP000032304};
RN [1] {ECO:0000313|EMBL:KJB52932.1, ECO:0000313|Proteomes:UP000032304}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=23257886; DOI=10.1038/nature11798;
RA Paterson A.H., Wendel J.F., Gundlach H., Guo H., Jenkins J., Jin D.,
RA Llewellyn D., Showmaker K.C., Shu S., Udall J., Yoo M.J., Byers R.,
RA Chen W., Doron-Faigenboim A., Duke M.V., Gong L., Grimwood J., Grover C.,
RA Grupp K., Hu G., Lee T.H., Li J., Lin L., Liu T., Marler B.S., Page J.T.,
RA Roberts A.W., Romanel E., Sanders W.S., Szadkowski E., Tan X., Tang H.,
RA Xu C., Wang J., Wang Z., Zhang D., Zhang L., Ashrafi H., Bedon F.,
RA Bowers J.E., Brubaker C.L., Chee P.W., Das S., Gingle A.R., Haigler C.H.,
RA Harker D., Hoffmann L.V., Hovav R., Jones D.C., Lemke C., Mansoor S.,
RA ur Rahman M., Rainville L.N., Rambani A., Reddy U.K., Rong J.K.,
RA Saranga Y., Scheffler B.E., Scheffler J.A., Stelly D.M., Triplett B.A.,
RA Van Deynze A., Vaslin M.F., Waghmare V.N., Walford S.A., Wright R.J.,
RA Zaki E.A., Zhang T., Dennis E.S., Mayer K.F., Peterson D.G., Rokhsar D.S.,
RA Wang X., Schmutz J.;
RT "Repeated polyploidization of Gossypium genomes and the evolution of
RT spinnable cotton fibres.";
RL Nature 492:423-427(2012).
CC -!- COFACTOR:
CC Name=Zn(2+); Xref=ChEBI:CHEBI:29105;
CC Evidence={ECO:0000256|ARBA:ARBA00001947};
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DR EMBL; CM001747; KJB52932.1; -; Genomic_DNA.
DR RefSeq; XP_012440271.1; XM_012584817.1.
DR AlphaFoldDB; A0A0D2Q3I4; -.
DR STRING; 29730.A0A0D2Q3I4; -.
DR EnsemblPlants; KJB52932; KJB52932; B456_008G285500.
DR GeneID; 105765623; -.
DR Gramene; KJB52932; KJB52932; B456_008G285500.
DR KEGG; gra:105765623; -.
DR eggNOG; KOG1343; Eukaryota.
DR OrthoDB; 124800at2759; -.
DR Proteomes; UP000032304; Chromosome 8.
DR GO; GO:0004407; F:histone deacetylase activity; IEA:UniProtKB-EC.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR CDD; cd09992; HDAC_classII; 1.
DR Gene3D; 3.40.800.20; Histone deacetylase domain; 1.
DR InterPro; IPR000286; His_deacetylse.
DR InterPro; IPR023801; His_deacetylse_dom.
DR InterPro; IPR037138; His_deacetylse_dom_sf.
DR InterPro; IPR023696; Ureohydrolase_dom_sf.
DR InterPro; IPR001876; Znf_RanBP2.
DR PANTHER; PTHR10625:SF16; HISTONE DEACETYLASE 15; 1.
DR PANTHER; PTHR10625; HISTONE DEACETYLASE HDAC1-RELATED; 1.
DR Pfam; PF00850; Hist_deacetyl; 1.
DR PRINTS; PR01270; HDASUPER.
DR SUPFAM; SSF52768; Arginase/deacetylase; 1.
DR PROSITE; PS01358; ZF_RANBP2_1; 1.
PE 4: Predicted;
KW Chromatin regulator {ECO:0000256|ARBA:ARBA00022853};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000032304};
KW Repressor {ECO:0000256|ARBA:ARBA00022491};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 111..130
FT /note="RanBP2-type"
FT /evidence="ECO:0000259|PROSITE:PS01358"
FT REGION 1..71
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..18
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 19..49
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 579 AA; 63743 MW; 87F357ADA39CC91C CRC64;
MVSETVQGSC VTNGGTKSNE SFKRKHLGSD EHASASRHDS SDAKGDIGTS ERDIAANINE
DTQADDASKK VRLPKELTFQ DMYNNQDAFD DDDEDDSDWE PVQKHIEILK WFCTNCTMVN
LDDVFLCDIC GEHKESGILR HGFYASPFSP EVELVQVESE ATGREKEIWS EASASNCSTA
VGFDERMLLH SEVEIKSHPH PERPDRLRAI AASLSAAGIF PGKCCLIPAR EITLEELQMV
HSSEHIEVVE LTRQMFSSYF TPDTYANEHS AHAARLAAGL CADLASAIFS GRVRNGFALV
RPPGHHAGVT QAMGFCLHNN AAVAALAAQA AGAKKVLIVD WDVHHGNGTQ EIFDQNKSVL
YISLHRHEGG KFYPGTGSAF EVGTKGAEGY CVNIPWSRGG VGDNDYIFAF QHVVLPIASK
FAPDFTIISA GFDAARGDPL GCCDVTPAGY TQMTHMLSTL SGGKLLVVLE GGYNLRSISS
SATAVIKVLL GESCECEPEN VVPSKAGLLT VLEVLKIQMK YWPNLSSSFE KLQLQRAMYS
VEKKQKQVKR RRVFEPPLWW RWGRKQLLFH ILTGHFHLK
//
