ID A0A0D2QNQ7_GOSRA Unreviewed; 704 AA.
AC A0A0D2QNQ7;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 26.
DE RecName: Full=Protein FAR1-RELATED SEQUENCE {ECO:0000256|RuleBase:RU367018};
GN ORFNames=B456_007G081700 {ECO:0000313|EMBL:KJB40888.1}, Gorai_018232
GN {ECO:0000313|EMBL:MBA0589486.1};
OS Gossypium raimondii (New World cotton).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=29730 {ECO:0000313|EMBL:KJB40888.1, ECO:0000313|Proteomes:UP000032304};
RN [1] {ECO:0000313|EMBL:KJB40888.1, ECO:0000313|Proteomes:UP000032304}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=23257886; DOI=10.1038/nature11798;
RA Paterson A.H., Wendel J.F., Gundlach H., Guo H., Jenkins J., Jin D.,
RA Llewellyn D., Showmaker K.C., Shu S., Udall J., Yoo M.J., Byers R.,
RA Chen W., Doron-Faigenboim A., Duke M.V., Gong L., Grimwood J., Grover C.,
RA Grupp K., Hu G., Lee T.H., Li J., Lin L., Liu T., Marler B.S., Page J.T.,
RA Roberts A.W., Romanel E., Sanders W.S., Szadkowski E., Tan X., Tang H.,
RA Xu C., Wang J., Wang Z., Zhang D., Zhang L., Ashrafi H., Bedon F.,
RA Bowers J.E., Brubaker C.L., Chee P.W., Das S., Gingle A.R., Haigler C.H.,
RA Harker D., Hoffmann L.V., Hovav R., Jones D.C., Lemke C., Mansoor S.,
RA ur Rahman M., Rainville L.N., Rambani A., Reddy U.K., Rong J.K.,
RA Saranga Y., Scheffler B.E., Scheffler J.A., Stelly D.M., Triplett B.A.,
RA Van Deynze A., Vaslin M.F., Waghmare V.N., Walford S.A., Wright R.J.,
RA Zaki E.A., Zhang T., Dennis E.S., Mayer K.F., Peterson D.G., Rokhsar D.S.,
RA Wang X., Schmutz J.;
RT "Repeated polyploidization of Gossypium genomes and the evolution of
RT spinnable cotton fibres.";
RL Nature 492:423-427(2012).
RN [2] {ECO:0000313|EMBL:MBA0589486.1, ECO:0000313|Proteomes:UP000593578}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=8 {ECO:0000313|EMBL:MBA0589486.1};
RC TISSUE=Leaf {ECO:0000313|EMBL:MBA0589486.1};
RX PubMed=30476109;
RA Grover C.E., Arick M.A. 2nd, Thrash A., Conover J.L., Sanders W.S.,
RA Peterson D.G., Frelichowski J.E., Scheffler J.A., Scheffler B.E.,
RA Wendel J.F.;
RT "Insights into the Evolution of the New World Diploid Cottons (Gossypium,
RT Subgenus Houzingenia) Based on Genome Sequencing.";
RL Genome Biol. Evol. 11:53-71(2019).
RN [3] {ECO:0000313|EMBL:MBA0589486.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=8 {ECO:0000313|EMBL:MBA0589486.1};
RC TISSUE=Leaf {ECO:0000313|EMBL:MBA0589486.1};
RA Grover C.E., Arick M.A. II, Thrash A., Conover J.L., Sanders W.S.,
RA Peterson D.G., Scheffler J.A., Scheffler B.E., Wendel J.F.;
RL Submitted (APR-2020) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Putative transcription activator involved in regulating light
CC control of development. {ECO:0000256|RuleBase:RU367018}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|RuleBase:RU367018}.
CC -!- SIMILARITY: Belongs to the FHY3/FAR1 family.
CC {ECO:0000256|ARBA:ARBA00005889, ECO:0000256|RuleBase:RU367018}.
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DR EMBL; CM001746; KJB40888.1; -; Genomic_DNA.
DR EMBL; JABEZZ010000007; MBA0589486.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0D2QNQ7; -.
DR STRING; 29730.A0A0D2QNQ7; -.
DR EnsemblPlants; KJB40888; KJB40888; B456_007G081700.
DR Gramene; KJB40888; KJB40888; B456_007G081700.
DR eggNOG; ENOG502QSJE; Eukaryota.
DR OMA; FWVDTRS; -.
DR Proteomes; UP000032304; Chromosome 7.
DR Proteomes; UP000593578; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0008270; F:zinc ion binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:UniProtKB-UniRule.
DR InterPro; IPR004330; FAR1_DNA_bnd_dom.
DR InterPro; IPR031052; FHY3/FAR1.
DR InterPro; IPR018289; MULE_transposase_dom.
DR InterPro; IPR006564; Znf_PMZ.
DR InterPro; IPR007527; Znf_SWIM.
DR PANTHER; PTHR31669:SF157; PROTEIN FAR1-RELATED SEQUENCE; 1.
DR PANTHER; PTHR31669; PROTEIN FAR1-RELATED SEQUENCE 10-RELATED; 1.
DR Pfam; PF03101; FAR1; 1.
DR Pfam; PF10551; MULE; 1.
DR Pfam; PF04434; SWIM; 1.
DR SMART; SM00575; ZnF_PMZ; 1.
DR PROSITE; PS50966; ZF_SWIM; 1.
PE 3: Inferred from homology;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723,
KW ECO:0000256|RuleBase:RU367018}; Nucleus {ECO:0000256|RuleBase:RU367018};
KW Reference proteome {ECO:0000313|Proteomes:UP000032304};
KW Zinc {ECO:0000256|RuleBase:RU367018};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00325,
KW ECO:0000256|RuleBase:RU367018}.
FT DOMAIN 564..600
FT /note="SWIM-type"
FT /evidence="ECO:0000259|PROSITE:PS50966"
FT REGION 108..127
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 704 AA; 80983 MW; 512D861AFD884651 CRC64;
MADSYVALEE EGDGCCVVEE NENPMVLYDF RKEDEHLNLE FSQHVVGGVV EPTLDMEFIS
EDDARNFYNA YAKQTGFSIR MNSYYRSKKD NLIISREFCC SKEGFRRDKH SRKTDSGDDT
KRRRARPITR EGCKALMTVR KRENGKWYVA KLEKNHNHEL VIPAMRHFLR SHKEEDDPKK
SLNGTIGSMG VGLNASVNVS PEDYNSFGKL GFAAQNNVNF IRRGRLSNFG VDAQSLLAFV
KVMQTSDPAF YYAIQVDDED RLRSVFWVDT RSRIAYNCFS DVISFDTTYQ VNQYKMPFAP
FIGVNHHRQS VLFGCALLAD ETESTFIWLF TTWLEAMSGR QPGLIMTDYD SAISRAVESV
FPKSRHRYCK RHILSKIPKE IGHVFSSLPK TFQVEFEKCI NNSETPEEFE SAWQLLLDKC
SLRGNEWLQS LYNDRKLWVS TYVRDTFFAG MYSIQPSKSV SSLFDGYVNA GTALQDLAEQ
YERALDGRYE KEVRAEFETF YTKPVLKTPL PMEKQAAEVY TRKLFLVFQD EIYESLVLAV
KSSLDDGLSK TFEVARFDEE HKVYRVGINI ADQIASCSCK MFEFEGILCR HVIAVFKATN
IFLLPQHYIL KRWTKNAKEE AKFDALPSVE IHDNSRKGKK QYNLLYQEAI KCAEEGMASD
HSFNVALNAL REARIKIVSA KKNAINVQKL ETASSTHYTD DKTT
//
